Oncorhynchus masou masou (cherry salmon): 135530622
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Entry
135530622 CDS
T10723
Name
(RefSeq) protocadherin-9
KO
K16498
protocadherin delta 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
135530622
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omm01009
]
135530622
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135530622
Protein phosphatases and associated proteins [BR:
omm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135530622
Cell adhesion molecules [BR:
omm04515
]
Cadherins
Protocadherins
135530622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
7tm_3
MAP17
EphA2_TM
V_ATPase_I
DUF6377
Motif
Other DBs
NCBI-GeneID:
135530622
NCBI-ProteinID:
XP_064814982
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MDLTDFYLLAALVACFWMDPSIAQELIYPIREELQENVLIGNIPKDLNVSHTNAATGASA
NLVYRLVSKAGDNPLLRVQSSTGEIFTTSNRIDRERLCPGPSFEENECSFEIEVVILPND
YFRLIKIKIVVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYQL
VNGQSAFGLDVVETPEGEKWPQLIVQQNLDRELKDTYVMKIKVEDGGTPQKSSTAILQVT
VTDVNDNKPVFKENQIQVHIPENSPIGTSVVQLQATDADVGANAEIKYMFGTQVSPATKR
LFALNGTTGLITVQRPLDREETAIHKLSVLASDGSSSPARATITINVTDVNDNPPNIDLR
YIISPINGTVFLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAVYDNQYLL
ETSALLDFEGTKEYNFKIIASDSGKPSLNQTALVRVRLEDENDNSPIFSQPVIELAVMEN
NKRDLFLTTLSATDEDSGKNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREDQDRFLFT
VTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDSDA
GENAAVTLSILSDNENFILDPYSGVIKSNVSFDREQQSSYTFDVRAVDSGRPPCSSAAKV
TINVIDVNDNTPIVIYPPSNTSFKLVPLSSIPGSVVAEVFAVDGDTGMNAELKYTIVSGN
TKGLFRIDPVTGNITLEEKPAISDIGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTVGNA
TVIYDLIRRTMETPLDRNIGESSETYQSGDYLTIMIAIVAGAMVVIVVIFVTVLVRCRHT
SRFKAAQRKKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEENKPDDPAHEPIN
GNISLPAELEEPGHFDWNAAPTTTFKPSSPDLARHYKSASPQSAFHLKADTPVSVKKHHM
IQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGSVHPSRQVKDNFYWSIS
TAYNCPVQQC
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggatctaacagacttttacttgttggctgctctcgttgcctgtttttggatggaccct
tctatagcccaggaactgatctatcctattagagaggaactgcaggaaaacgttctcatt
ggaaacataccaaaggacctgaacgtctcccatacaaacgctgctaccggagctagcgct
aacctggtctacaggctggtgtctaaagccggcgacaaccctctgctcagagtgcagagc
agcacgggagagatatttaccacctccaatcgcatcgacagggagaggctctgtcccggt
ccctcgttcgaggagaacgaatgctccttcgagatcgaggtggtgattttacccaacgac
tacttcagattgataaagattaagatcgtagtcaaggacaccaacgacaacgctcccatg
ttcccgtctcctgtcatcaacatctccatcccggagaatacgctgatcaacagtcgtttc
gccatcccctccgccaccgaccccgacaccggccccaacagtgtacacaagtaccagctg
gtgaacgggcaaagcgccttcgggttggacgtcgtagagacgcccgagggggagaagtgg
ccgcagctcatcgttcagcagaacctggacagggaactgaaggacacgtacgtcatgaag
atcaaggtggaggacggaggcacgccacagaaatccagcaccgccatcctccaagtcacc
gtcacagacgttaatgataacaagccggtgttcaaggagaaccagatccaggtccacata
ccggagaactcgcctatagggacgtccgtagtccagctgcaggctacggacgcagacgtg
ggggcgaacgccgaaatcaaatacatgttcgggacgcaggtgtccccagctaccaagaga
ctatttgctttaaatggtaccactggccttataacagtacagcgacccctcgatagagag
gagaccgccatacacaagttatccgtgttagcgagcgacggcagctccagcccagccaga
gctaccataactataaacgtgacggacgtgaacgataatccgccaaacatcgatctgaga
tatatcatcagtccaataaacggcactgtgttcctctcggagaaagacccaatcaacacc
aagatagctttgatcaccgtgtcggacaaggacacggacgtcaacggcaaggtcatctgt
ttcatcgagaaggacgtcccctttcacctcaaagcggtgtacgacaaccagtatttacta
gagacgtcagcgctgctcgactttgaggggaccaaagagtacaacttcaaaatcatagcc
tctgactctggcaagccgagcttgaaccagacagcgttggtaagggtgaggctggaggat
gaaaatgacaactcgccgatcttcagccaacctgtcatcgagctggccgtcatggagaac
aacaaacgcgatctcttcctcacgactctcagcgccaccgacgaggacagcgggaaaaac
gctgagatcgtctaccaactgggccctaacgcctcgttctttgacctggaccgtaaaacc
ggtgtcctcacggcctcccgggtgtttgatcgcgaggaccaggatcggttcctcttcacg
gtaacggcccgagacaacgggacgcctccactccagagccaggcggcagtcatcgtgaca
gtgctcgatgaaaacgacaacagccccaagttcacccacaaccacttccagttctttgtg
tcagagaacctgcccaagtacagcacggtgggggtgataactgtcacagactcagacgct
ggggaaaatgccgccgtcacgctttcgatactcagcgacaacgagaactttatcctagac
ccgtactctggagtaataaagtccaatgtgtcctttgaccgggagcagcagagctcctac
accttcgacgtccgggcggtggatagcgggcggcccccatgttcctcggccgccaaggtg
accatcaatgtcatcgacgtaaacgacaacacccccatcgtcatctaccccccttccaac
acctccttcaaactggttcccctctcgtccatccctggatcggtggtggccgaggtcttt
gctgtggacggtgacacagggatgaacgcagagctcaagtacaccattgttagcggcaac
accaaaggtctgttccggatcgaccctgtgacaggaaacatcaccctggaggagaagcct
gctatctccgacatcggcctccatcggctggtcgtgaacattagcgacctgggttaccct
aagtccctgcacaccctggtgctggtgttcctctacgtgaacgacacggtcggcaacgcc
acggttatctacgacctcattcgccgcaccatggagacgcccctggacaggaacattggg
gagagcagtgagacttaccagagcggagattatctcaccatcatgatcgccatcgtagcc
ggggcgatggtggtgattgtggtgatcttcgtgacagtcctggtacgctgccgtcacacc
tcgcggttcaaggcggcccagagaaagaagcagggcgctgaatggatgtctcccaaccag
gagaacaagcagaacaagaagaagaagcgcaagaaaaggaagtcgcctaaaagctccctc
ctgaactttgtcaccatcgaggagaacaagccggacgacccggctcatgagcccatcaac
ggcaacatcagcctgcctgccgagctggaggagcctggccactttgactggaacgctgct
cctacgaccaccttcaagccctccagtccagacctggcacggcactacaagtccgcttct
ccgcagtccgcgttccacctcaaagcggacacgccggtctccgtgaagaaacaccacatg
attcaggagctccctctggacaacaccttcgtagggggctgtgatactctctccaagaga
tcctccactagttcagaccacttcagtgcctcggagtgcagttcccagggaggattcaag
actaagggatccgtacacccgtccagacaggtaaaagataacttttactggtctataagt
actgcatataactgcccggtccaacagtgctga
DBGET
integrated database retrieval system
