Oncorhynchus masou masou (cherry salmon): 135530684
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Entry
135530684 CDS
T10723
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135530684
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
omm03310
]
135530684
Transcription factors [BR:
omm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
135530684
Nuclear receptors [BR:
omm03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
135530684
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GFIT
Motif
Pfam:
Hormone_recep
DUF2716
Motif
Other DBs
NCBI-GeneID:
135530684
NCBI-ProteinID:
XP_064815011
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Position
1:complement(20254857..20264115)
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AA seq
397 aa
AA seq
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MSRDAVKFGRMSKKQRDSLYAEVQKHQQRILNERQQQTCEAEALARVYSSSLTNGLSTLN
HEIGGTYANGHVIELPKGQVNGGATGGYYHGMDSTQPSPDQSGLDLAGIKHIKQEPVYDL
TPVANLFNYSTYQDSQLAHSNVSMGELDRIAQNIIKSHLETCQYTADELQQLAWQTHSYD
DIKMYQSKTRDVLWQQCAIQITHSIQYVVEFAKRISGFMELCQNDQILLLKSGCLEVVLV
RMCRAFNPLNNTVLFEGKYGGMQMFKALGCDDLVSAVFDFAKSLCSLQLTEEEIALFSAA
VLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHMDEDALAKLIGRIPMLSAVCTLHTE
ELQAFQQLHPETVNVLFPPLYKELFNPDPNAAITMPK
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtccagagatgcggtgaagtttggccgcatgtccaagaagcagcgtgacagcctgtac
gccgaggtacagaagcaccagcagcggatcctaaatgagcggcagcagcagacgtgtgag
gcagaggccctggcgcgcgtctactcctccagcctgaccaacggcctcagcaccctcaac
cacgagatcggaggcacctacgccaacggccacgtcatcgagctccccaagggccaggtg
aacggtggtgccacgggtggctactaccatggcatggactccacccagccctccccggac
cagtcaggcctggacttggcgggcattaagcacatcaagcaggagccggtgtacgacctg
acccctgtggctaacctgttcaactatagcacctaccaggacagtcagctggcgcacagc
aatgtcagcatgggagagctagatcgtatcgcccagaacattataaagtctcacctggag
acctgtcaatacacagcagatgagctgcagcagctggcctggcaaacacactcctacgat
gacatcaagatgtaccagagcaaaacgcgagacgtgctgtggcagcagtgtgccatccag
atcacccattccatccagtatgtggtggagtttgccaagcgcatctcaggcttcatggag
ctttgccagaacgaccagatcctcctgctcaagtcaggttgtctggaggtggtcctggtt
agaatgtgtcgggcgtttaacccactcaacaacacagtactgtttgaggggaagtacggg
ggcatgcagatgttcaaagcactaggttgtgacgacttggtcagcgctgtgtttgacttt
gccaagagtctgtgctctctgcagctcactgaggaggagattgctctgttctctgcagca
gtgctcatctccacagaccgtccatggctgatggaacccaggaaggtgcaaaagctccag
gagaagatctactttgcgctgcagcacatcatgcagaagaaccacatggacgaggacgcg
ctggctaagctgattggtcggatacccatgctgtcggccgtgtgtactctccacaccgag
gagctgcaggccttccagcagcttcaccctgagacggtgaacgtgctcttccccccgctc
tacaaggagctgttcaatcccgaccccaatgcagcgatcaccatgcccaagtga
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