Oncorhynchus masou masou (cherry salmon): 135532937
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Entry
135532937 CDS
T10723
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03018
RNA degradation
omm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135532937
09123 Folding, sorting and degradation
03018 RNA degradation
135532937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135532937
03041 Spliceosome [BR:
omm03041
]
135532937
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135532937
mRNA degradation factors
5'-3' decay
Lsm complex
135532937
Spliceosome [BR:
omm03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
135532937
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
135532937
NCBI-ProteinID:
XP_064816439
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MSTALESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEDTDSSLDLGNIRAEPLNSIVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccgccctcgagagctacatcaaccgtacagtggccatcgttacatctgacggg
cggatgatagtgggcaccctgaagggctttgaccagaccatcaacctgattctggatgag
agtcatgagcgtgtgttcagttcctctcagggcgtggagcaggtggtcctgggactatat
atcgtcagaggagacaacgtagctgtgattggggagattgacgaggacacagattcttcg
ctggacctggggaacatccgcgctgaaccccttaactctatagtccactga
DBGET
integrated database retrieval system
