Oncorhynchus masou masou (cherry salmon): 135533226
Help
Entry
135533226 CDS
T10723
Name
(RefSeq) low-density lipoprotein receptor-related protein 2-like isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
Membrane trafficking [BR:
omm04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
135533226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135533226
NCBI-ProteinID:
XP_064816738
LinkDB
All DBs
Position
1:complement(21744059..21755698)
Genome browser
AA seq
1403 aa
AA seq
DB search
MYISLLTLNNHQFTHLGKLKHVSKLFLLQHITTSVKEGCNYKTILFFPAEAEFLSDSDSR
EEEAKRAGFFRLKSVSVLRAAAQTPLNCNLGTKPCKDGSECVLHQHVCDGEADCRDGSDE
EDCTVACNNGQFLCAHGKKCIDQRQVCDGVAQCQDRSDELDCLNSMEGCVHHCDNKTRCL
PDTFLCDGERDCLDGTDEANCDSDSTDYLKSHHNVAEDGNNGNTTMSAPAPLKCPFGTKP
CRDRIECVLYNHVCDGEVDCKDGSDEEECILECERGQFQCAHGKKCIDQRQVCDGVAQCQ
DRSDELACLKPMEGCVHHCDKTRCLPDTFLCDGERDCLDGTDEANCADESCNSGEFRCTS
GQCLSVSMRCDGHPDCQDRSDEESCTEPPQCTTKLRCPQSQECLLEEWVCDGEQDCKDGS
DEKNCKMVQLKCGDFQWACTSKNQCVPKAWRCDGTKDCADESDEAGCGQVATCPSHQFQC
GSTWECLDTALVCNTVRNCANGSDEGGNCQAKCPDKTQCAHNCYSTPHGTRCGCKAGYRL
QEDTVSCVDIDECEGGRPGVCSHLCVNTQGSFQCHCYPGYLLESDGRRCKITGEPYLLAS
VQTELFLFGLRSSSLDVLVSSAKKAILSLDYDWRDQKVFWVSLDSESIKWSSLDQKKRGT
LVKGIKSDCIAVDWVGRNLYWIDGIGGGRIIAVGLNSTIINSMDLTVILDEDFEQPRSLA
LLPQKGIMFWSEIGNEVKIERAGMDGSERRVVVSHSLSWPGGLAVDTLGERIYWTDEKLR
CIGSANLDGGDIELLQMMETTNPFSVTVYNDLLYWSDTRRRTIQRAHKVTGKNRKVLLKR
PGQPFGLKIIHPLLQTSNERPCENLRCSHLCVLGPGPKGVCKCPSGLLLAEDGLTCSNLV
NSAFLLVLSPTVVTQIYLQTMHSAVGLKSWPEHLALPLPNVNEAAMLDYTLQDQTLYLAD
SGQSSIVLFKLKETGLVPRGQFLQLKGDTVTALALDWITLSVYWSSTKQPRLQVTSSSGE
HTAVLIQDIGSLESIALHPLSGRLCFTNLAKQGEGAQVECAHMDGVKRAPVWKDAFQPTS
LTFSNKGNEIYWADIGYGVIGSVRVDGTGYKEFKTGDGLTAFALSNGMLLWVTDSDTTKV
WYRDDPLTKKLWFEVNTEIVSLKAYSKSSQMGSNLCSDGNGDCSHLCLALPGGRTCRCAH
DHYPVNVTYCAPDQHCPAGSRPCLDGHTCFPLEKFCDGHPDCSDTSDENCVHLKGKSVKA
KAPNQLPSPSFPIPADPGSTSLDNSWLVRNLEAQQCSEKHCNGNGECVETNGGISCACGL
GYSGDSCQNQLTKTMQGPLIYGAIGLCAAIVVISVLAAVVKRKTANTRRANPVAKQTSMI
ELEKGEGASPNSDFAEEVVSSVD
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgtatatttcattactcactttaaataatcaccaatttacacatctgggtaaattaaag
cacgtttcaaaactattcctattacagcatataaccacatcagtgaaggaaggatgcaat
tataaaactattctattctttcctgcagaagcagaattcctgtctgatagtgatagcaga
gaggaagaggcgaagcgagcgggtttcttccgcctaaaatctgtctcagtattgcgtgca
gcagcgcagaccccgttgaactgcaacctgggcaccaaaccttgcaaggatggatctgag
tgtgtactccaccaacatgtgtgcgacggagaagccgactgtagggatggttctgacgag
gaggactgcactgtcgcatgcaataatgggcagtttctgtgtgcccatgggaagaaatgc
attgaccagcggcaggtgtgtgacggtgtggcccagtgtcaggaccgctctgatgagttg
gactgcctgaattccatggagggctgtgttcaccactgtgacaacaagacccgctgcctc
ccagacaccttcctctgtgatggagagagggactgcctggatggcactgacgaagccaac
tgcgattcagactctactgattatcttaaaagtcatcacaatgttgctgaggatggcaac
aatgggaataccacaatgtctgcaccagcacccctcaagtgcccttttggcactaaacca
tgccgggacaggattgagtgtgttctttacaaccatgtgtgcgatggagaggtggactgt
aaggatggctcggatgaggaagagtgtatattagaatgtgaacgtggccagtttcagtgt
gcacatgggaagaaatgcattgaccagaggcaggtgtgtgacggtgtggcccagtgtcag
gaccgctctgatgagttggcctgcctgaagcccatggagggctgtgttcaccactgtgac
aagacccgctgcctcccagacaccttcctctgtgacggagagagggactgcctggatggc
actgatgaggccaactgtgctgatgagagctgcaatagtggggagttccgttgcaccagt
ggccagtgtttatccgtaagcatgcgctgtgatgggcatcctgactgtcaggatcgctct
gacgaggagagctgcaccgagcccccccagtgcaccaccaagctccggtgcccacaaagc
caggagtgcctgctggaggagtgggtctgtgatggggagcaggactgtaaagatggctct
gatgaaaagaattgcaagatggtccaattgaagtgtggcgatttccagtgggcctgtaca
tctaagaaccagtgtgttcccaaagcatggagatgtgatggaacaaaggactgcgccgat
gaaagtgatgaggcaggatgtggtcaggtagcaacatgtccctctcaccagttccagtgt
ggcagtacctgggagtgtttggacacagccctggtgtgtaacacggtcagaaactgtgct
aatggttctgacgagggtggcaactgccaagcaaagtgtccagacaaaacccaatgtgcc
cataactgttacagcacaccacatggaacgaggtgtggctgcaaggctggttaccgactc
caagaggacacagtgtcctgtgttgatattgatgagtgtgaaggcggcagaccaggtgtt
tgcagccacctatgcgtcaacacccagggctccttccagtgtcattgctaccctggttac
ctgttggaatctgatggtcgccgctgcaagatcacaggtgagccctacctactggcctct
gtgcagactgagctgttcctgtttgggctgagaagcagcagtctggatgtcctggtgtcc
tctgctaagaaagccatcctgtccctggactatgactggagggatcagaaagtgttctgg
gtcagcctggattcagagagcatcaaatggtcctctctagaccagaaaaagagaggaact
cttgtcaaaggcatcaaatctgattgcattgctgttgactgggtagggagaaacctgtac
tggattgatggcattggaggtggtcggattattgctgttggattaaactcaaccatcata
aactctatggatctcacagtcatcctcgatgaggactttgaacaacctcgctctctggca
ctcctgccacagaaggggatcatgttctggtcggagattggtaacgaggtgaagattgag
cgggcgggaatggacgggtctgagaggagagtagtggtcagtcacagcctcagctggcca
ggcggtctggctgtggacacactcggggagaggatctactggacggacgagaagctccgg
tgcatcggctcagccaacctggatggcggggacattgagcttctgcagatgatggagaca
accaacccgttctctgtcacagtttacaatgacctgctctactggtcagacaccaggagg
agaactattcaaagggctcataaagtaactggaaagaaccgcaaagttctactcaaacga
cctggacaaccttttggactgaaaatcattcatccacttctgcagacaagcaatgagcgt
ccctgtgagaaccttcgttgctctcacctgtgtgtgctgggcccaggccccaaaggggtc
tgcaagtgtccctctggtctgctcctagctgaggatggcctcacttgctccaacctggtc
aactctgccttcctcttggtgctctcgccaactgttgtcacacagatctacctacagacc
atgcacagtgctgtgggtctgaaaagctggccggagcacctcgccctacctctccccaat
gtcaacgaggcagcgatgttggattacaccctgcaagatcagactctgtacctagctgat
tctggccaatcgtctatagtcctcttcaagctgaaggagaccggcttggtgcctcgcggc
cagttcctgcaactcaaaggggacacagttacagccctggctctagactggataaccctc
agcgtatactggagtagcaccaagcagccacggctgcaggtcacctcttccagtggggaa
cacactgctgtgttaattcaggatattggtagtctggagtccatagcgcttcacccactc
agtggaagactctgttttaccaacctggccaagcagggggaaggcgctcaggtggagtgt
gctcacatggatggggtgaagcgcgctccggtgtggaaggatgcttttcagcccacctcc
ctgactttctccaacaagggcaatgagatctactgggctgacatcggttatggggtgatc
ggctctgtcagagttgatggtactggatacaaggagtttaagactggggatggcctgact
gcatttgcactcagcaacggaatgctcctctgggtgacagacagtgacacaaccaaagtt
tggtatagagatgatccattgacgaagaagctttggttcgaggtaaacactgaaattgtc
agtttgaaggcgtacagcaagtccagccagatgggctccaacctctgctcagatgggaat
ggagactgcagtcacttgtgtttggctcttcctggtggtaggacctgtaggtgtgcccat
gaccattacccagtcaatgtcacatactgcgccccagaccagcactgcccagctggaagt
agaccctgtctggatggacacacatgcttccccttggagaagttctgtgacggacaccct
gactgctctgacacttcagatgagaactgtgtccatctcaaagggaagtctgtcaaggcc
aaagccccaaaccagcttcccagtcccagctttcctatacctgcagatcctggctccacc
tctctggacaacagttggctggtgagaaacctggaagcccagcagtgtagtgaaaagcac
tgcaatgggaatggggagtgtgtggagaccaatgggggcatctcctgtgcctgtggttta
ggctacagtggagactcctgccaaaaccagctcaccaagactatgcaaggcccactcatc
tatggggccattggcctctgtgctgcaattgttgttatcagtgtccttgctgcggtggtt
aagaggaagactgcaaacacaaggagagccaaccctgtggcaaagcagactagtatgatt
gagctggagaaaggtgaaggagcttcacctaacagtgactttgcagaggaagtggtgtcg
tctgtggattaa
DBGET
integrated database retrieval system
