Oncorhynchus masou masou (cherry salmon): 135533460
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Entry
135533460 CDS
T10723
Name
(RefSeq) exosome complex component CSL4-like isoform X1
KO
K07573
exosome complex component CSL4
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135533460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135533460
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135533460
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
135533460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
Motif
Other DBs
NCBI-GeneID:
135533460
NCBI-ProteinID:
XP_064816841
LinkDB
All DBs
Position
5:complement(13082203..13085988)
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AA seq
117 aa
AA seq
DB search
MSPMKLCVPGDRLCSTEDCMPGTGVYLRHGYIYSSLAGYVLRKNEGEELPVISVVRETEA
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDRVCF
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgaagctgtgtgttccaggtgataggctatgcagcacagaagactgtatg
cccggtactggggtgtacctacgacacggctacatctactcctcgctagcaggctacgta
ctcaggaagaacgaaggagaggagctaccagtcatctcggtggtgagagaaaccgaggct
cagctactaccagatgtaggagccatagtgacctgtaaggtgaccagtatcaaccccagg
tttgccaaggtccacatcctctacgttggttccacaccactgaaggaccgttttagagga
accatcaggaaagaagatgtacgagcaacagaaaaagacagggtatgtttttga
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