Oncorhynchus masou masou (cherry salmon): 135533508
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Entry
135533508 CDS
T10723
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03030
DNA replication
omm03410
Base excision repair
omm03420
Nucleotide excision repair
omm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135533508
03410 Base excision repair
135533508
03420 Nucleotide excision repair
135533508
03430 Mismatch repair
135533508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
omm03032
]
135533508
03400 DNA repair and recombination proteins [BR:
omm03400
]
135533508
DNA replication proteins [BR:
omm03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
135533508
DNA repair and recombination proteins [BR:
omm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
135533508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_5
RuvB_N
Rad17
AAA_7
AAA_30
AAA_16
AAA_17
AAA_33
AAA_14
nSTAND3
BRCT_2
AAA_18
NPHP3_N
NTPase_1
RNA_helicase
Zeta_toxin
AAA_19
Motif
Other DBs
NCBI-GeneID:
135533508
NCBI-ProteinID:
XP_064816872
LinkDB
All DBs
Position
Unknown
AA seq
1160 aa
AA seq
DB search
PVDSEEEVVEQKQKAQKPNPLFLRLLFLLPRKTRAVRRDSETDSDSDNFLSLKKPQGNGV
TKQGKARPGTKESHRSPPKPTLAPATGKGGIKKSPPAPVTPKSAPPQTKHTPTSVLDYFG
SGSVQRSDRKLVASTKRKTDPDESLTDEVIAQQLQMDEDMELERQVHEDEEFAKTLAMLD
QQPHAKKARKYSGEDLGSATSANKSSLNSSHSSATSQSQSNGRDHNQDVIGPSPKKVPPL
VKTSSKLSMMKKREEEEEGGGKTNLSINVSVSPKKERISPKKESLTPSSTDRKSKLKTGS
VTMVTTPTTLKTSPKKESTSPEESEKKRGNSSAFRSFLNRDGPRALGSKPIPTGAENCLE
GCVFVISGVLESMEREDAKSLIERYGGKVTGNISKRTTYLVMGRDGGAAKTEKAEGFGTK
ILDEDGLLELIRSTPGKKSKYLIAAEAENKGFKSRTPDTKTTTRTPKKSPKTRSMTPSPS
KPGSASGRGVRVGDSVTLLGRGSGSGVKRGLDLGGRSQSSSSSATLSLPSFAGEDFSLLW
VDKYRPQNLKAVIGQQGDQSQANKLLRWLKNWHTHHAVGGAKPAGRGFGKFTSSKDNGSS
FKAALLSGPPGVGKTTTAALVCEELGYSYVEMNASCTRSKHSLKQVIAESLNNTSINNFY
TGSSQTVSSKHVLIMDEIDGMAGNEDRGGIQEMIGLIKQSRIPIICMCNDRNHQKIRSLA
NYCFDLRFQRPRLEQIKGAMMSIAFKEGLKVPPPALNEMILASNQDIRQVLHNLSMWSAK
DKVMTYDRVKEDANNARKDMKLGPFDVCRKVFSKGEESGHMTLIDKSDLFFHDYSLAPLF
VQENYIHVKPAAAGGDVKSHLVLLSKTADSICDGDLVDRQIRSKQAWSLLPTQAIYSSVL
PGELMSGYMNCFPSFPSWLGKFSSSNKHSRIIQELASHMSLKTLSSRQAVSLDYLPYLRM
ALLCPLQRQGAEGAGQAVQLLDDYHLVREDVDSLMEISIWGGQPDPYAKLDPKVKSAFTR
AYNRETHLTPYSLQPIKKGRRGGGVEAEPGGEGQEEQPEEEEEEEGVAADAMIKLKKARP
SKEPKKEKTTAGDSGKGKGKGKGKAREVTPNLSDNSPHPQISKRTVQHLFSDVLKNKPLN
GLTTHLPGLITVWRGDRTSF
NT seq
3484 nt
NT seq
+upstream
nt +downstream
nt
acctgtagactctgaggaggaggtagtggagcagaagcagaaggcccagaaaccaaaccc
tctcttcctccggctcctcttcctcctgccaagaaagacccgtgcagtacgacgagactc
tgagacagattcagacagtgataacttcctgtctctgaagaagccccagggtaatggagt
gaccaaacaagggaaggcccgccccgggaccaaagagagccacaggtcccccccgaaacc
cacccttgctcccgccacagggaaaggagggataaagaagtctcctccagcccccgtcac
ccctaaatcagcgcccccgcagaccaaacacacccccacctctgtcctggactactttgg
cagtgggagtgtccagcgctcggacaggaaactggtggccagtaccaagaggaagactga
ccctgatgagtcgctgactgatgaggtcatcgcccagcagctgcagatggacgaggacat
ggagttggagaggcaggtccacgaggacgaggagtttgccaagacgctggccatgttgga
ccaacaaccacacgccaaaaaggctcgtaaatactctggtgaggatctggggtctgccac
gtcagccaacaaaagcagccttaactcctcccacagcagcgctaccagccaatcacagtc
caatgggcgggatcacaaccaggacgtgatcggtccgtcccctaaaaaggtcccccctct
tgttaagaccagttccaaactgtccatgatgaagaaaagggaggaagaagaggaaggagg
aggcaagacaaatctgagtatcaatgtgtccgtctctcccaaaaaggagcgcatctctcc
caaaaaggagtccctaaccccttcaagcacagacaggaagtccaagctcaaaacaggaag
tgtaaccatggtgaccacacccacgactcttaaaacctcccccaagaaagagagcaccag
tccagaggaatcagagaagaagcgagggaactcctcagcattccgtagtttcctgaaccg
agacggacccagagccctggggtctaaacccatacccactggagcagagaactgcctgga
gggatgtgtgtttgtgatctctggtgtgttggagagtatggaacgtgaggatgctaagag
cctgatagagcgttacggagggaaggtgaccggcaacatcagtaagaggaccacatacct
ggtgatgggcagagatggaggagccgccaagactgagaaggcggaggggtttggaactaa
gatcctggatgaggatggtctgttggagctcatcagaagtacaccagggaagaagtccaa
gtacctgattgctgccgaggccgagaacaagggatttaagagcagaacaccggacaccaa
gaccaccacccgcacccccaaaaagtcccccaaaactcgctccatgacccccagcccctc
caaacctggctcagcgtcggggcgaggagtcagggtaggggacagcgtgaccctcctagg
gaggggttcaggttcaggggtcaaaagagggctggacttggggggtaggagccaatcatc
ttcctcctctgccactctgtctttgccctcattcgcgggtgaagatttcagtctgctgtg
ggtggataagtaccgcccccagaatctgaaggctgtgattggtcagcagggagaccagag
ccaagccaataagttgcttcgctggctgaagaactggcacacccaccatgcagtgggagg
ggctaaaccagcagggagagggtttggtaagttcaccagtagtaaggataacggttcaag
cttcaaggcagcgctgttatctggacctcctggcgtgggcaagaccaccaccgctgcctt
ggtctgtgaggagctgggctacagctacgtagagatgaatgccagctgtactcgtagtaa
gcacagtctgaaacaggtgatcgctgagtctctgaacaacaccagtatcaacaacttcta
cacaggttcgtctcagacagtcagtagtaaacatgttctcatcatggatgagattgatgg
catggccggcaacgaagaccgcggagggatacaggagatgataggtctgattaaacagtc
caggatccccatcatctgtatgtgtaatgaccgtaaccatcaaaagatccgctctctggc
caactactgctttgacctgcgcttccagagaccacgactggagcagatcaagggtgccat
gatgtccattgctttcaaagaggggctgaaagtcccgcctcctgccctcaacgagatgat
cctggcatccaatcaggacatccgacaggtcctccacaacctgagcatgtggtcggctaa
ggacaaggtcatgacctacgaccgggtcaaagaggacgccaacaacgcacgcaaggacat
gaagttgggtccgttcgacgtgtgccggaaggtgttctccaagggggaggagtcaggtca
catgacgttgattgacaagtcggacttgttcttccacgattactccctggcccccctctt
cgtccaggagaactacatacatgttaaacctgctgctgctggtggtgatgtgaagtccca
cctggtgctcctcagtaagacagctgattctatctgtgatggagacctggtggacagaca
gatacgttccaaacaggcctggtctctactgcccacacaggccatctattccagtgtgtt
accaggagagttgatgagtggttatatgaactgcttcccctcgtttccctcctggctggg
aaagttctcctccagcaataaacactcacggatcattcaggagctggcctctcacatgag
cctcaagacattaagtagcagacaggcagtgagcctggactacctcccgtacctccgcat
ggccctgttgtgtcctcttcagaggcagggggcggagggggccggtcaggccgtccagct
gttagatgactaccacctggtcagagaggatgtggacagcctcatggagatcagcatctg
gggggggcagcctgacccctacgctaaactggaccccaaggtgaaatcagcgttcacgag
ggcctataaccgggagacccacctgacaccttactccctccaaccaatcaagaagggccg
tcgtggcgggggagtggaggcggaaccgggaggagaggggcaagaggaacagcctgagga
agaggaggaggaggaaggtgttgcagctgacgccatgatcaaattgaagaaggccagacc
ctccaaggagcccaagaaagaaaagacaacagctggggattctgggaagggaaagggcaa
aggcaagggcaaagccagggaagtgacccctaacctctcagacaactccccccaccccca
aatttcaaagcgaactgtacaacacctcttctcggacgttctgaagaacaaacccctcaa
cggtttgaccacccacctacctggtcttatcaccgtgtggcgcggagacagaaccagctt
ctag
DBGET
integrated database retrieval system
