Oncorhynchus masou masou (cherry salmon): 135534933
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Entry
135534933 CDS
T10723
Symbol
poli
Name
(RefSeq) DNA polymerase iota isoform X1
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
135534933 (poli)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omm03400
]
135534933 (poli)
Enzymes [BR:
omm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
135534933 (poli)
DNA repair and recombination proteins [BR:
omm03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
135534933 (poli)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
UBM
IMS_C
IMS_HHH_1
IMS_HHH
Cdd1
DNA_pol_lambd_f
Motif
Other DBs
NCBI-GeneID:
135534933
NCBI-ProteinID:
XP_064817813
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All DBs
Position
1:21838927..21846021
Genome browser
AA seq
758 aa
AA seq
DB search
MDVGVEDIDEDETDWNSICSDFVQPPHVVIHGGKYCSKVPAPPVQRVVLHFDLDCFYAQV
EMIRNPALRKVPLGIQQKYIIVTCNYVARDLGVTKLMLVTDAKEKCPQLVLVKGEDLTHY
RETSYKVTELLMSFCPLVERLGFDENFMDITEMVERRMEQTPESAHYSYEGHVYNLDTSD
AKVMVHPRLAVGSHIAAELRAEIHSKLGLTGCAGIATSKLLAKLVAGAFKPNQQTTLLPE
SVKDIMGSLNGLRKVPGVGHQTAKRLQALGLVGVQDLQLFPLADLVREFGVSTAQHLQNL
ALGIDDTPVTPTGAPQSLSNEDSFKKMSSTNKVWQKVKDLLSSILDRMHKDGRQPLTLRL
TIRRYSATNKWFSRESRQCPIPNHIGQKITSGNCDALAQLVTMAMKLFHKMVDTNTAFHL
TLLNVCFSNLQAKCAAVSKGSIASFFTHRPEKTQASSRCQEDLSQSVLGNLHGQAGSDVE
GKTEELTGQDASHWIPDTPSNLKIKPYTQSTMHSPEASQQRPMVGECCIGGTVDYKMTNS
PGMTDVHPLPPNIDPEVFRLLPEDIQKELLSAAYPETTHGLHSHGTQSVRPTVSDPADRA
HAFHHNHSEQPASSSQPAACKLNDSFHSTPIDLRETLKGFDRQPNAPTTNNQQEHTVSSL
HYSLTDLLEEGKSSTGLVSQRQLADCGFPGSVDPKVFSELPPEVQRELLSEWRQQIPVLK
ISSSLKKQGKRPLAREKKAPAKSSQANKLLNYFKPSSG
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgggtgttgaggacattgatgaggatgaaactgactggaacagcatttgctcg
gactttgttcaacccccccatgttgtgatccatggtggcaaatattgcagtaaggtacct
gcaccaccagtacagagagtcgtcctgcattttgacctggactgtttctatgcccaggtt
gaaatgatccgcaacccagcactgcggaaggtgcctttaggtattcagcaaaagtacatc
atcgtcacctgtaactacgtggccagggaccttggtgtgacaaagctgatgttagtgacg
gatgccaaagagaagtgtcctcagctcgtgctggtcaagggagaggacctgacacactac
agagagacatcttacaaagtcacagagttgctgatgtcgttctgtccattagtagaacgg
ctagggtttgatgagaacttcatggacatcacagagatggtggagaggaggatggaacag
accccagagtctgctcactattcatacgaaggccacgtttacaatcttgacacctcagat
gccaaagtcatggtacaccctagactagcggtaggctcacatatcgcagctgaactgaga
gcagagatccacagcaagctgggcctcactggctgtgcgggcattgctaccagtaagctg
ctggccaaactggtggcgggtgccttcaagccaaatcaacaaaccacacttttgccagag
agtgtgaaagacattatgggcagtctaaatggtttacgtaaagtaccaggagtaggccac
cagactgctaagaggcttcaggccctaggattggttggtgtgcaggacctgcagctcttc
ccattggctgacctggtgagggagtttggagtttccactgctcagcatctccagaacctg
gctttgggcattgatgacactccagtcacccccactggtgctccacagtctcttagcaat
gaagactccttcaagaaaatgtcctcaaccaataaagtttggcagaaggttaaagatctg
ttgagtagcattttagacaggatgcataaagatggcaggcagcctctgacccttcgactg
accatccggcgttactctgcaaccaacaagtggttcagccgggagagccggcagtgtccc
atccccaaccacattgggcaaaagataacctctggcaactgtgatgccttggcccagctg
gtcaccatggccatgaagctcttccacaagatggtggacaccaacacagccttccacctc
accctcctcaacgtgtgcttcagtaacttgcaggccaagtgtgctgctgtcagcaaggga
tccattgcctccttcttcacacacagacctgagaaaacacaggcctcctctcggtgccag
gaggatctgtctcaaagtgtgcttggtaacctccatggacaggctggatctgatgttgaa
ggtaagacagaggagttgactggtcaggatgcatcacactggataccagacacacctagc
aaccttaagatcaagccttacacacagtcaacaatgcatagccctgaggcctcccagcag
cggcctatggtgggtgagtgctgcataggtggaacagtagattataaaatgaccaacagt
cctgggatgacagatgttcatccattgccccccaacattgaccctgaggttttcagactc
ctgcctgaggacatccagaaggaactgttatcagctgcctacccagagaccacccatggc
ctccacagccatggcactcagtccgtcagacccacagtatctgatccagcagacagagcc
cacgcatttcaccacaaccattcagaacagcctgcctcttcctctcagcctgctgcatgc
aaacttaatgactcatttcacagcactcccatagacctaagagaaactttgaagggcttt
gacagacagcccaatgcaccaacaaccaacaaccaacaagaacacacagtctcctccctg
cactattcactcacagacctcttggaggagggaaagtcctctacaggcctcgtgtcacag
aggcagttggctgactgtggtttcccaggaagtgtggaccccaaggtgttctcagaacta
cctccagaggttcagagagagctactgtctgagtggagacaacagatacctgtccttaag
atttcctcctctttgaaaaaacagggcaaacgccccctggcccgagagaagaaggctcca
gctaaaagcagtcaggctaataaattattgaactatttcaaacccagctcaggttag
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