KEGG   Oncorhynchus masou masou (cherry salmon): 135535120
Entry
135535120         CDS       T10723                                 
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B-like
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Pathway
omm04144  Endocytosis
omm04517  IgSF CAM signaling
omm04530  Tight junction
omm04810  Regulation of actin cytoskeleton
omm05100  Bacterial invasion of epithelial cells
omm05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:omm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    135535120
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    135535120
  09144 Cellular community - eukaryotes
   04530 Tight junction
    135535120
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    135535120
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    135535120
   05100 Bacterial invasion of epithelial cells
    135535120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omm04131]
    135535120
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:omm04812]
    135535120
Membrane trafficking [BR:omm04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    135535120
Cytoskeleton proteins [BR:omm04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     135535120
SSDB
Motif
Pfam: Beta-prop_EML_2 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_Aladin WDR55 Beta-prop_WDR3_2nd Beta-prop_EML WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st eIF2A PEP5_VPS11_N Beta-prop_TEP1_2nd Rax2 Beta-prop_IFT122_1st EIF3I WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 135535120
NCBI-ProteinID: XP_064817913
LinkDB
Position
Unknown
AA seq 381 aa
MAYHSFLLEPISCHSWNKDRTQIALCPNNHDVHIYKKDGTKWTKIHELKEHNGQVTGIDW
APESNRIVTCGTDRNAYVWSLKGEVWKPTLVILRINRAARCVSWSPKENKFAVGSGSRLI
SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTVWGSKMPFGEVLFESGPSGVSGGAGDGAGGGWVHGVCFSHSGNRLAWTSHDSTVAIA
EGGKTSTISSLSSETLPLLCVSFITENSLVAAGHDCYPVLFVYDGTKGSVTFGGKLDVPK
QTSQRGISARERFQNLDRRATSSETTEQGLESLHKNSISQISVLEGGKSKCTTFCTTGMD
GGMVTWDVKSLESALKDLKIV
NT seq 1146 nt   +upstreamnt  +downstreamnt
atggcttaccacagcttcttgctcgagccaatcagctgccactcctggaacaaggaccgg
acccagattgctctgtgtcccaacaaccatgatgtccacatctataagaaggacgggacc
aagtggaccaagattcatgaactgaaggagcacaacggacaggtcacaggtatagactgg
gctccagagagtaaccgtatcgtgacctgtgggacggatcgtaacgcgtatgtctggtct
ctgaagggggaggtgtggaagcccaccctggtcatcctccgtatcaaccgggctgctcgc
tgtgtcagctggtctcccaaggagaacaagttcgctgtgggcagcgggtcacgcctcata
tccatctgctactttgaacaggagaatgactggtgggtctgtaagcacatcaagaagccg
atccgttccaccgtcctcagtctggactggcatccgaacaacgtgctgctggcggctgga
tcctgtgacttcaaatgcagggtgttctcggcatacatcaaggaggtggaggagaagccg
gggcccacagtctgggggtccaagatgccctttggagaggtgctgtttgagtctgggccc
tcaggggtgtctgggggggctggagatggggcaggagggggatgggtccacggggtctgt
ttctcccacagcgggaaccgcctggcctggacgtcacatgactccactgtggcgatcgca
gagggaggcaagaccagcacgattagcagtctgagctctgagacccttcctctgctgtgt
gtcagctttatcactgagaacagcctggtggccgctggtcatgactgctacccggtgctg
tttgtgtatgacggtactaagggctcagtaacattcggagggaagctggacgttcccaag
cagacgtctcagagagggatcagcgccagggaacgcttccagaacctggaccgccgagcc
acctcgtctgagaccaccgagcagggcctggagagtctgcacaagaacagcatcagtcag
atctctgtgctggagggagggaagagtaaatgtaccacgttctgtaccactgggatggac
ggaggaatggtcacatgggatgtcaagagtctggagtctgccctgaaggatctcaagata
gtctga

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