Oncorhynchus masou masou (cherry salmon): 135535359
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Entry
135535359 CDS
T10723
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04110
Cell cycle
omm04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
135535359 (smc3)
04114 Oocyte meiosis
135535359 (smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135535359 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
omm00535
]
135535359 (smc3)
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
135535359 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
135535359 (smc3)
Proteoglycans [BR:
omm00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
135535359 (smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
MFD_D3
Motif
Other DBs
NCBI-GeneID:
135535359
NCBI-ProteinID:
XP_064818093
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All DBs
Position
5:17878378..17902948
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSPKSNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLQTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSSKRETCGDKSRHLRDAQQDARDKVEETERVVREKKSKISAMKEEKEQLSSERQEQIK
QRTKLELKSKDLQEELAGNSEQKKRLLKERQKLLEKIEEKQKELQETEPKFNTVKEREER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTETNKEKNLEQYSKLDQDLNEVKTRVEELDKKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREELEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVINGYHGIVMNNF
ECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILTEFNKMNLPGEVTFLPLSKLDVRDTAY
PETNDAIPMISKLRYSQQFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTMLTATSSELEGINKRIKDTLARSEDLDVLIDKAEIEVKDHAKS
MDRWKNVEKEQNDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELERGHKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDTEGGQSQDEGEGGTDSEKG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ISAEQAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaaacaggtcatcattcaggggttccgcagttacagggaccagactgtggtg
gatcctttcagtccaaagtccaatgtcatcgtgggaagaaatggatctggaaaaagtaac
tttttctacgccattcagtttgtgctcagtgatgaattcagccatcttcgccccgaacag
cgcctggccttgctccatgagggaactggtcctcgtgtcatctcagcttttgtggagatt
atatttgacaattctgacaacaggttgccgatcgacaaagaggaggtatccctccgccgt
gtcatcggcgccaagaaggaccagtacttcttagacaagaagatggtgactaaaaatgac
gtcatgaacctcttggagagtgctggtttctcccgtagtaacccctactacatcgtcaag
caggggaagattaaccagatggctacagcccctgattcccagcgtctgaagctgctgcgt
gaggttgcaggaaccagggtgtacgacgagcgcaaggaggagtccatctccctcatgaag
gaaacagagggtaagagagagaagatcaatgagctgctgaagtacattgaggagcgtctc
cagaccctggaggatgagaaggaggagctggctcagtaccagaagtgggacaagatgagg
agggctcttgagtacactatctataaccaggagctcaacgagacacgtgccaagctggac
gagttgtcctccaagagagagacctgtggagacaagtccagacatctgagagatgcccag
caggatgccagagacaaagtagaggagacggagcgtgtggtgcgtgagaagaagtctaag
atcagtgccatgaaggaggagaaggagcagctgagctcagagagacaggagcagattaaa
cagaggaccaagctggagctcaaatccaaagacctgcaggaggagctggccggcaacagt
gaacagaagaaacgtctgctgaaggagcggcagaagctgctagagaagatagaggagaag
cagaaggagctgcaggagactgagcccaagttcaacactgtgaaggagagggaggagagg
ggcatcgccagactggcccaggccacccaggagagaacagacctgtacgccaagcagggc
cgtggcagccagtttacttctaaagaggagagggacaagtggatcaagaaggaactcaag
tccctagaccaggccatcaatgacaagaagaggcagattgctgccatccataaagacctg
gaggacactgagaccaacaaggagaagaacctggaacagtatagtaaactggaccaggac
ctgaatgaggtgaagaccagggtggaagagctggacaagaaatactacgaagtcaagaat
aagaaggacgagctgcagagcgagagaaactatctgtggcgggaggagaacgctgagcag
caagccctggcagccaaacgagaggagctggagaagaaacaacagctccttagagcagcc
accggcaaggccattctgaacggtattgacagcatcaacaaggtgctggagcatttccgc
agaaaggggatcaaccagcacgtcatcaacggttaccatggcatcgtcatgaacaacttt
gagtgtgagcccgccttttacacctgtgtggaggtcaccgcgggaaccaggttgttttac
cacatagtggagacagacgaggtgagcaccaagatcctgacggagttcaacaagatgaac
ctgcctggagaggtcaccttcctgcccctcagcaagctggacgtcagggacaccgcctac
cctgagaccaacgatgccatccctatgatcagcaagctgcgctacagccagcagtttgac
aaggccttcaagcacgtgtttggaaagaccctgatctgtcgtagcatggaggtgtccacc
cagctggccagggcattcaccatggactgtataacactggagggagaccaggtgtcccac
cgtggagcactgacagggggttactatgacaccaggaagtcacgtctggagctgcagaag
gacatgaggaaggctgaggaggagctgggagagctggaggctaaactcaatgagaacctc
cgcaggaacatcgaacgtatcaacaatgagatcgaccagctgatgaaccagatgcaacag
attgagacccagcagaggaagttcaaggcctccagagactccatcctgtctgagatgaag
atgctcaaggagaagaggcagcagtccgagaagacgttcatgccgaagcaacgttcactg
cagtctctagaggccagtctccatgccatggagtccaccagggagtctctgaaggctgag
ctggggacagacctgctctctcagctcagtctggaggaccagagacgtgtggatgacctc
aacgacgagatcagacagctgcagcaggacaacaggcagctgctgaatgagaggatcaag
ctggaggggatcatgaccagggtggagacgtacctcaacgagaacctacggaaacgcctc
gaccaagtagaacaggagttgaatgagctgagagagactgagggaggcaccatgctcaca
gccacctcctcagagctggagggaatcaacaaacgcatcaaagatacactggcacgctcc
gaggacctggatgtgctgatcgacaaggcggagattgaggtcaaggaccacgccaagagc
atggaccgctggaagaacgtagagaaggaacagaacgacgccatcaaccatgacaccaag
gagttggagaagatgaccaaccgacagggcatgctgctgaagaagaaagaggagtgcatg
aagaagatcagggagctggggtccttaccccaggaggccttcgagaagtaccagaccctc
acactcaaacagctgttccgtaagctagagcagtgcaacacagagctgaagaagtacagc
cacgtgaacaagaaggccctggaccagtttgtcaacttctctgagcagaaggagaagctg
atcaagcgccaggacgagctggagcgaggacacaagtccatcatggagctcatgaacgtg
ctggagctcaggaagtacgaggccatccagctcacattcaaacaggtgtctaagaacttc
agtgaggtgttccagaagctggttccagggggcaaggccaccctggtgatgaaaaagggt
gacacggaggggggtcaatcccaggacgagggggaggggggcaccgacagcgagaagggc
tcaggctctcagagcagtgtgccctctgtagaccagttcaccggagtcggcatcagggtg
tcgttcacggggaagcagggggagatgagggagatgcagcagctctctggaggtcagaag
tccctggtggccctggccctcatcttcgccatccagaagtgtgaccccgctcctttctac
ctgtttgatgagatcgaccaggccctggacgcacagcacaggaaggctgtctcggatatg
attgtagagctggcgggccatgcccagtttatcaccactacgttcagacctgagcttctg
gagtcagccgacaagttctacggagtcaagttcagaaacaaggtgagtcacattgacgtg
atctcggcagagcaggcgaaagactttgtggaggacgacactacccatggttaa
DBGET
integrated database retrieval system
