KEGG   Oncorhynchus masou masou (cherry salmon): 135535360
Entry
135535360         CDS       T10723                                 
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A isoform X1
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Pathway
omm04144  Endocytosis
omm04517  IgSF CAM signaling
omm04530  Tight junction
omm04810  Regulation of actin cytoskeleton
omm05100  Bacterial invasion of epithelial cells
omm05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:omm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    135535360
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    135535360
  09144 Cellular community - eukaryotes
   04530 Tight junction
    135535360
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    135535360
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    135535360
   05100 Bacterial invasion of epithelial cells
    135535360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omm04131]
    135535360
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:omm04812]
    135535360
Membrane trafficking [BR:omm04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    135535360
Cytoskeleton proteins [BR:omm04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     135535360
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40 Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_Aladin Beta-prop_WDR35_TULP_N Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_EML WD40_Gbeta EIF3I Rax2 Beta-prop_HPS5 Beta-prop_EIPR1 RMC1_N Beta-prop_SPT8 Tricorn_2nd
Other DBs
NCBI-GeneID: 135535360
NCBI-ProteinID: XP_064818089
LinkDB
Position
Unknown
AA seq 370 aa
MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYQKSGNQWVKSHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSLKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESDNDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGAVLAEFGGAGGGGWVHSVSFSSSGNRLAWVSHDSTVTVVDGTKGSTPS
QLKTEFLPLLSVLFISENSVVAAGHDCCPMLFRCDDGGSLTFVSKLDLPKASITRNISAM
ERFRNMDKRATTEDRNTALETLHQNSITQVSIYEGDQRDCRKFCTTGIDGAMTIWDFKSL
EASIQGLRIM
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgtcactgcaccagtttctgcttgagcccatcacctgtcacgcctggaaccgggacaga
acccagatcgccatcagtcccaacaaccatgaggttcacatctatcagaagagcggtaac
cagtgggtgaagagtcatgagctgaaggagcacaatggacacatcacaggtatcgactgg
gctcctaagtccgaccgtatcgtgacgtgcggagcggaccgtaacgcctacgtctggtct
ctgaaggacggcgtctggaagcccacgctggtcatcctgaggatcaacagagctgctacc
ttcgtcaagtggtctcctctggagaacaagttcgctgtgggcagcggcgccagactcata
tcagtctgctacttcgagtctgacaacgactggtgggtgagtaagcacatcaagaagccg
atccgttccaccgtcctcagtctggactggcatccgaacaacgtgctgctggcggctgga
tcctgtgacttcaaatgcagggtgttctcggcctacatcaaggaggtggaggagaagccg
ggccccaccccctgggggtccaagatgccgtttggggcggtgctggctgagtttgggggt
gctggggggggaggatgggtccactctgtgtccttctcctcctctggtaacagactggcc
tgggtctcacacgactccactgttactgtggtggacggtaccaagggatccactccgtct
cagctgaagacggagttcctccctctgctcagtgttctcttcatctctgagaacagcgtg
gtggcagcgggtcatgactgttgtcccatgctgttccgttgtgatgacggagggtccctg
acgtttgtctctaagctggaccttcctaaagcctccatcactagaaacatctccgctatg
gaacgcttcagaaacatggacaagagggcgaccacagaggaccgtaacacagccctggag
acactgcaccagaactctatcactcaagtctctatctatgagggagaccagagggactgt
cgtaagttctgcaccacgggcatcgatggagcgatgaccatctgggacttcaagagtctg
gaggcgtccatccaggggctgaggatcatgtga

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