Oncorhynchus masou masou (cherry salmon): 135535383
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Entry
135535383 CDS
T10723
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
135535383 (shoc2)
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Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_LRWD1
LRR_9
LRR_13
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
135535383
NCBI-ProteinID:
XP_064818125
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Position
5:18009451..18040136
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AA seq
580 aa
AA seq
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MSSTLGNKDKDWKEKDLKGGPTGGKEKEKEAKALAGLGKDPKAKGKDAKEGKKDAGSASP
AVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPTSIKEL
TQLAELYLYSNKLQSLPSEVGCLSGLVTLALSENSLTSLPESLDSLKKLRMLDLRHNKLR
EIPAVVYRVTSLTTLYLRFNRITAVERDIRNLAKLTMLSIRENKIKQLPAEIGELCNLIT
LDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIPRS
LAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNM
EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDIC
GLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQ
LTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSK
LSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactttaggtaacaaagacaaagactggaaagagaaggacctgaaaggaggt
ccgacaggagggaaagaaaaggaaaaagaggccaaggctctggctggtttaggcaaggat
cccaaggccaaagggaaagacgccaaagaaggaaagaaggatgcaggttccgcgtcgcct
gccgtcgccttctctgtggacaacacgataaagaggcccaacccggcgccggggacacgc
aagaagtccagcaacgccgaggtgatcaaagagctcaacaagtgccgagaggagaactcc
atgcgtctggacctgtccaagcgttccatccacatgttacccacctccatcaaggaactc
acccagctggcagagctctacctgtacagcaacaagctccagagcctcccctcagaagtg
ggctgcctgtctggcctggtcaccttagccctgagtgagaactctctaaccagcctccca
gagtccttggactccctgaagaagttgaggatgctggacctgaggcataacaaactgagg
gagataccggcggtggtttaccgggtgacgtcgctgaccacactgtacctgaggttcaac
cggatcacggcggtggagagggacatccggaacctggcgaagttgaccatgctcagcatc
cgtgagaacaagatcaaacagctgcctgccgaaataggggagctctgtaacctcatcacc
ctggatgtagcccataaccagctggaacatctacccaaggagatcggcaactgcacccag
atcaccaacctggacctacagcacaacgagctactggacctaccagaaactataggtaac
ttggcaagcataaaccgcttgggtctgcggtacaaccggttgtcagccatccccaggtcg
ctagccaagtgcagagaactggaagagctcaacctagaaaacaacaacatctccgtgtta
ccagaaggtctcctgtctagtctggtgaatctgaccagtctaaccctggcgaggaactgt
ttccagtcctacccggtgggaggaccctcccagttctccaccatctactctctcaacatg
gagcacaaccgcatcaacaagatcccctttggaatcttctccagggccaaagtcctcagc
aaactcaacatgaaggacaaccagttgacgtctctgcctctagactttggcacgtggacc
agtatggtggagctcaacctggccaccaatcagctgacaaagatccctgaggacatctgc
ggtctcgtttcgcttgaggtcttgatattgtccaacaatcttctcaagaagttgccacat
ggtattggcaacctgaggaaactacgggagctggacttggaggagaacaagctggaatcg
ctcccgaatgaaatcgcttacctgaaagatttacagaaactagtgttgaccaataatcag
ctgaccacgttgccccgtgggatcggtcacctcaccaacctgacccacctgggtctggga
gagaacctgttgcaacacctgccagaggagatcggtacactggagaacttggaggagctg
tacctcaatgacaaccccaacctgcacagcctcccgtttgagctggccctgtgcagcaag
ctgtccatcatgagcatcgagaactgtcctctcagccatctgcccccgcagatcgtcgcc
gggggcccctccttcattatccagttcctcaagatgcaggggccctaccgggccatggtc
tga
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