Oncorhynchus masou masou (cherry salmon): 135535404
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Entry
135535404 CDS
T10723
Name
(RefSeq) high affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
135535404
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omm02000
]
135535404
Transporters [BR:
omm02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
135535404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
135535404
NCBI-ProteinID:
XP_064818151
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MSLNVPGLIVMAIFYLLILGTGIWASMRSKKVERKCTGSDGMEITLLAGRNINLLVGIFT
LTATWVGGGFILGIAEAVYNPTLGLVWALMPVPYVLTFFLGGFFFAKPMRENKYVTMMDP
FQIKYGNVLSSLLIFPALIADVLWVARTLVSLGGTMSVILDLPYVYSICISSVVAIIYTL
LGGLYSVAYTDVIQLILIFLSLWICVPFMMTNPNSMDITLTAFNETFQAPWVGKLELRDA
GKWIDDFMVLALGGLAYQAFYQRILSASSYTQAQVTCFASSAFCLVLGIPSVLVGAVAAS
TDWNLTSYGSPTPYERGQAGSILPIALQYLTPSYVSVIGIGAVAAAVMSSMDSALLSSAS
MFSSNIYKNIIRNQASDREMQWVIRTSVVVCGLAGTALTFLDNSVLVFWLVGVDMSYTIM
FPQLVCVLFFKVSNGYGASVGYLLALVLRILSGEPLINLPPVIHFPGFRKDAEGVMTQFF
PFRTTIMLTSLCSILVASAVTSVIFNKGLLPERWDVFQIKRSQAKVTALTRLKKEESKKD
CVEAKEAVVNRQLLDTSC
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgaacgttccgggcctgatcgtcatggcgatcttctacttgctgatcctaggc
acggggatctgggcctcgatgcgctccaagaaggtggagaggaagtgtaccgggtcggac
gggatggagatcacgctgctcgccggacgcaacatcaacctgttggtggggatcttcact
ctgactgctacgtgggttggaggagggtttatcctcggtatagcggaggcagtctacaac
cctaccctgggtctggtctgggctctgatgccagtcccctacgtactcaccttcttcctg
ggtggttttttctttgccaagcctatgagggaaaacaagtacgtgacaatgatggatccg
ttccagataaagtatggcaacgtcctgagcagcctgctcatcttcccagcgctcattgca
gacgtcctgtgggtcgctaggacgctggtcagcctaggtggcactatgagtgtgattctg
gacctgccctatgtctactccatctgtatcagctctgtggtggccatcatctacactcta
ctgggaggactctactctgtagcctacaccgatgtcatccagctcatcctcatcttcctc
agtctgtggatctgtgtgccatttatgatgaccaacccaaactccatggacatcactctg
accgcattcaacgagacgttccaggccccctgggtcggcaagctggagcttagagacgcg
gggaagtggattgacgacttcatggtcctggctctgggaggcctggcctatcaggccttc
taccagaggatcctatcagcgtcgtcctacacccaggctcaggtcacctgcttcgcctcc
tcagctttctgcctggtgctgggcatcccgtctgtcttggtgggggctgtcgctgcatcc
acagactggaacctgactagctatggttctccgaccccatacgagcgtggccaggccggg
tccatcctccccatcgccctgcagtacctcaccccctcctacgtctccgtcatcggcatc
ggggccgtcgctgccgccgtgatgtcatccatggactccgccctcctcagctccgcctcc
atgttctcctccaacatctacaagaacatcatcaggaatcaggcctcagacagggagatg
cagtgggtgatccgtacctcggtggtggtgtgtggcctggcggggacggccctgaccttc
ctggataacagtgttctggttttctggctggtgggcgtcgacatgtcatacacaatcatg
ttcccacagcttgtctgtgtcctcttcttcaaggtgtccaacggctacggtgccagtgtg
gggtatctcctagcgttggtcctccgtatcctgagtggggaacccctcatcaaccttccc
cctgtcatccacttccctgggttcaggaaggacgcggagggcgtgatgacccagttcttc
ccgttccgtaccaccatcatgctgacgtctctctgctccatcctcgtcgcctccgccgtc
acctccgtcatcttcaacaagggcctgctgccggagaggtgggacgtgtttcagatcaag
aggtcgcaggccaaagtgacagcgctgaccaggctcaagaaagaagagagtaaaaaggac
tgcgtggaggccaaggaggcggtggtgaacaggcagcttctggacaccagctgctga
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