Oncorhynchus masou masou (cherry salmon): 135536274
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Entry
135536274 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04010
MAPK signaling pathway
omm04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135536274
04020 Calcium signaling pathway
135536274
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135536274
Ion channels [BR:
omm04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
135536274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
TMEM208_SND2
Motif
Other DBs
NCBI-GeneID:
135536274
NCBI-ProteinID:
XP_064818706
LinkDB
All DBs
Position
Unknown
AA seq
1761 aa
AA seq
DB search
MEEEEECNGDNNDDASSDISTLIVPYPELAPVIFFCLKQTTFPRSWCIRAVSSPWFERCS
IMVILLNCVTLGMYQPCENIDCSSDRCKVLQAFDVFIYVFFAVEMVVKMMALGIFGHRCY
LGDTWNRLDFFIVMSGMVEYSLDLQNINLSAIRTVRVLRPLKAINRVPSMRILVNLLLDT
LPMLGNVLLLCFFVFFIFGVIGVQLWAGLLRNRCYPKENFTLSKDISLPRPYYMADEDDE
RPFICSLAQDNGIMACTDVPARRELGRTCCLDKDDVTHRQGLGLSPEPLVNGSVSGPGLC
VNWNQYYTRCHTGHSNPHKGAINFDNIAYAWIVIFQVITLEGWVEIMYYVMDAHSFYNFI
YFILLIIIGSFFMINLCLVVIATQFSETKQREHQLMQEQRAQAHSSSTLASMTEPSAGCY
ESVFQLVCHVLRKARRRSMALCNRLLGRPKEVKGAGRRGGGEKTNVNGGGRGVAVHCPHH
TEPVHCPHHTEPEHASPGDSIALTVSPATDGCPHCTVALSISDGAGPADSLANLEVEEGA
LEKTDGEGSKCDAGKEEVKDAAPAKVSGGCRRGCGKLWEETTLKLLGIVESKYFNRGIMI
AILINTISMGIEHHNQPEELTNVLEICNIVFTSMFAMEMILKITASGCFNYLRNPYNVFD
GVIVIISVCEIIGQSDGGLSILRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCML
LMLFIFIFSILGMHIFGCKFSLKTEAGDTVPDRKNFDSLLWAIVTVFQILTQEDWNTVLY
NGMAATSPLAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSYSEDDSSPSNFDES
EKLNDSLKLSDPKICTLTPNGHLELTTLTPVMTPRGSYPTDRLTYALGSRKSSVMSLGKA
NLEQRRSFSLHHGRSSLHHHWGRPPPPQRAWNRRSSWNSLGCPSRGGRGMGAGVVGGSLR
VRSPHSHIHSLYHSAEHEFLLSPALRLPPHHAPPLPLLSRRNAIRHRDRRALSLELPNML
QVPGPPSHPNPRMRSVSGGGSSGSGGMVVEHHDCNGKAPSPIGVMGPQTAQLLTEVFPQL
NLAKDRSDLDEEIDYSLCFRIQKMMEVYRPDWCEKREDWSVYLFSPQNKFRLLCQSIIAH
KLFDYVVLSFIFLNCITVALERPKILQSSLERLFLTVSNYVFTAIFVAEMTVKVVSKGLY
LGEKAYLKSSWNVLDGFLVFVSLIDIVVSMAGGAKILGVLRVLRLLRTLRPLRVISRAPG
LKLVVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYYCLGLEVKNITNKSDCLQ
ANYRWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYHGLDAVGIDQQPSINNNPWMLLYF
ISFLLIVSFFVLNMFVGVVVENFHKCRQNQEVEEAXRREEKRQRRMEKKRRKAQKLPYYT
NYSHGRLMIHTLCTSHYLDLFITFIICINVITMSLEHYSQPQSLETSLKYCNYFFTTTFV
VESVLKLIGFGFRRFFKDRWNQLDLSIVLLSVMGIILEEIDYNASLPINPTIIRIMRVLR
IARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGELVCNADYP
CEGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRECPPGPSDYPCHAGLQFISPMY
FVSLVLTAQFVLINVVVAVLMKHLDDSNKEAQEDAEMDAEIELELAQGQLQLPTCCMGGL
GTGLVVAGASGAPGDFNRFFQ
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaggaggagtgcaacggtgacaataatgatgatgcgagcagtgacatcagc
accctaatagttccgtatcctgagctggctcctgtcatcttcttctgtctcaagcagacc
acgttccccaggagctggtgtatacgtgccgtgtccagcccgtggtttgagcgctgcagt
ataatggtgatattactcaactgtgtgaccctgggcatgtaccaaccctgtgagaacata
gactgctcttcagaccgctgtaaggtactacaggccttcgatgtgttcatctatgtcttc
tttgctgtggaaatggtggtgaagatgatggccctcggaatctttggccatcgctgttac
ctgggtgacacgtggaaccgtctggatttcttcatcgtcatgtcagggatggtagaatac
tccttggacctccagaacatcaacctctcagccatcaggacagtcagggtcctcagaccc
ctcaaagccatcaacagagttccaagtatgcgtatcctggtgaatctcctcctggacact
ctccccatgcttgggaatgtcctgctactctgtttcttcgtcttcttcatcttcggcgtc
atcggagtgcagctgtgggcgggactactgaggaaccgctgctaccccaaggaaaacttc
accctttctaaggacatctccctgcctcgcccttactacatggcagatgaggatgatgag
cgacccttcatctgctctctcgcccaggacaacggcatcatggcgtgcaccgacgtcccg
gcccgccgagaactaggacgtacctgctgcctggacaaggacgatgtgacacacagacag
ggtttggggctgagtcctgaacccctggttaatgggtcagtgagtgggcctggactgtgt
gtcaactggaaccagtattacacacgctgtcacacgggccacagcaacccacataaagga
gccatcaacttcgacaatatcgcctacgcttggatcgtcatctttcaggtgatcaccctg
gaaggctgggtagagatcatgtactatgtaatggatgctcactccttctacaacttcatc
tactttatactgctcatcatcattggttctttcttcatgatcaacctctgcctggtggtt
atcgccacccagttcagtgagaccaagcagcgggagcaccagctgatgcaggagcagaga
gcccaggcccactcttcctctactctagccagcatgactgagccctcggcaggctgctat
gaatccgtcttccagctggtctgccacgtcctccgcaaggcccgcaggaggtccatggcg
ctctgtaaccgactgttggggaggcccaaggaggtgaaaggagcagggagaagaggagga
ggagagaagacgaacgtgaatggaggaggaagaggagtagcggtccactgtccccaccac
accgagccggtccactgtccccaccacaccgagccggaacacgcctccccaggagactcc
atcgccctcacggtctcccccgccaccgacggctgcccccattgcaccgtcgccctgtca
atcagcgacggggcgggacctgccgacagcctggccaatttggaggtggaggaaggagct
ttggagaagacggacggggagggcagcaaatgcgatgccgggaaggaggaagtgaaagac
gcggctcccgctaaggtttctgggggatgtaggcgggggtgtgggaagctgtgggaggag
acgacgttgaagttgttggggatcgtggagagcaagtacttcaatagaggaattatgatc
gctatcctcatcaataccatcagtatgggcatcgaacaccacaaccagcctgaggaacta
accaacgtgttggagatctgtaacatagtgttcactagtatgtttgccatggagatgatt
ctgaagataacagcgtccggatgtttcaactatctgagaaacccctacaatgtgttcgac
ggtgtcatcgtcattatcagtgtgtgtgagatcatcggccagtctgacggaggtctgtcc
atattgaggaccttcagactccttcgtgtcctgaagctagtcaggttcatgccagcgctg
cgcagacagctcgtggtcctgatgaagactatggacaatgtggccaccttctgtatgctg
ttgatgctgttcatctttatattcagtatcttggggatgcatatctttggctgcaagttc
agcctgaagacagaggcaggagacactgttccagacaggaagaactttgactctctactc
tgggccatcgtcactgtgtttcagatcctcacccaggaagactggaacacggtgctgtat
aatggaatggctgccacctctcctctagctgctctgtacttcgtagctcttatgacgttt
gggaactacgtcctcttcaacctgctggtggccatcttggtagagggatttcaggcagag
ggagatgctaatcgctcctattcagaggatgacagttctccctctaactttgatgagagt
gagaagcttaatgattctctcaaactgtctgatcctaagatctgtactttgacccctaac
gggcacctggagttgaccacgttgaccccggtgatgactcccagggggtcgtaccccact
gacaggctgacctatgccctggggtcacggaagagcagcgttatgagtctgggcaaggcc
aacctggagcagaggagatcattctctctgcaccacggccgcagttccctgcaccaccat
tggggtcgccctccacctcctcagagagcatggaaccgcaggtccagctggaacagcctg
ggttgtccctcccgggggggaagggggatgggagcaggtgtggtgggaggaagcctccgt
gtccgaagcccccactcccacatccactccctttaccactcagccgaacacgagttcctc
ctctcccccgctctccgcctcccccctcaccacgctccccctctccccctcctctcccga
cgcaatgccatccggcaccgggaccgccgcgctctctccctggagctgccaaacatgctc
caggtccccggacctccgtctcaccccaaccccaggatgaggagtgtttctgggggaggg
agcagcggcagtgggggtatggtggtggagcaccatgattgtaatggaaaggctcctagt
cctattggtgttatgggtccccagactgcccaactcctaacggaggtcttccctcagctg
aacctcgccaaggacagatcggacctggatgaggagatagactatagtctctgtttccgt
atccagaagatgatggaggtgtacaggcctgactggtgtgagaaaagagaggactggtct
gtctacctcttctccccacagaacaagttcagactgctatgtcagtccattatagcccac
aagctctttgactacgtggttttatccttcatctttctcaactgtatcactgtagctctg
gagagacccaagatactgcagagcagcttggaaagacttttcctcaccgtctccaactat
gtcttcacagccatatttgtggctgagatgaccgtcaaggtggtctctaagggtctgtac
ctgggtgagaaggcctatctgaaaagcagctggaatgttctggatggtttcctggtcttt
gtgtcgttgattgacattgttgtgtccatggcgggcggggctaagatcctgggggtgctg
agagtgctcaggctgctcaggacattacgccctctcagggtgatcagtagagctccaggc
ctgaagctcgtggtagagactctcatcacgtctctgaagcctataggaaacatcgtcctc
atctgctgcgctttctttatcatcttcggcatcctcggtgtgcagctgttcaaggggaag
ttttactactgcctgggtctagaggtgaagaacatcaccaacaagtctgactgtctccag
gctaactacagatgggttcaccacaaatacaactttgataacctgggacaggctctgatg
tctctgtttgtgctggcatctaaagacggctgggtcaacatcatgtaccatggtctggat
gctgtgggcatagaccagcagccgtctattaacaacaatccgtggatgctcctgtacttc
atttccttcctcctcatcgtcagtttcttcgttctcaacatgttcgtgggcgtggtggtg
gagaacttccacaagtgcagacagaaccaggaagtggaggaggccnaaaggagggaggag
aaacgacagagacgcatggagaagaagaggaggaaggcccagaagctaccctactatacc
aactatagtcatggtcgtctgatgatccacactctgtgtaccagccactacctggacctc
ttcatcaccttcatcatctgtatcaatgtcattactatgtccctggagcactacagccaa
ccacagtcattggagacgagtctgaagtattgtaactatttcttcaccacaacctttgtg
gtggaatctgtcctcaagctcatcggcttcgggttccgacgcttcttcaaggacaggtgg
aaccagctggacctgtccatagtgttgttgtcagtgatgggcatcattctggaggagatt
gactacaatgcttctctacccatcaacccgaccatcatcagaatcatgagggtgctgcgg
atagcacgagttctcaagctattgaagatggctacaggaatgagagctcttctagacaca
gtggttcaggctctacctcaggtggggaacctgggcctgctgtttatgttgctgttcttc
atctacgctgctctgggggtggaactgtttggagagctggtgtgtaatgctgactacccg
tgtgagggcatgagtcggcacgccaccttcgagaactttggcatggcctttctcaccctc
ttccaggtctccaccggagacaactggaacggcatcatgaaggacaccctgcgtgagtgc
cctccaggacccagtgactacccgtgccacgctggactccaattcatctctcccatgtac
tttgtctccttagtcctcaccgcccagttcgtactcatcaacgtggtggtggctgtgctc
atgaagcacctggacgactcaaacaaagaggcccaggaggatgctgagatggatgccgag
atagagctggagctagcccagggacaactccaactacccacctgctgcatgggggggctg
ggcactgggctggtcgtggctggggcctctggagcgcctggtgattttaatagatttttt
cagtga
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integrated database retrieval system
