Oncorhynchus masou masou (cherry salmon): 135536747
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Entry
135536747 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SMURF1-like
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04120
Ubiquitin mediated proteolysis
omm04137
Mitophagy - animal
omm04144
Endocytosis
omm04340
Hedgehog signaling pathway
omm04350
TGF-beta signaling pathway
omm04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135536747
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
135536747
04350 TGF-beta signaling pathway
135536747
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135536747
04137 Mitophagy - animal
135536747
09144 Cellular community - eukaryotes
04520 Adherens junction
135536747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135536747
04121 Ubiquitin system [BR:
omm04121
]
135536747
03029 Mitochondrial biogenesis [BR:
omm03029
]
135536747
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
135536747
Membrane trafficking [BR:
omm04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
135536747
Autophagy
Mitophagy
Other mitophagy associated proteins
135536747
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
HECT type E3
135536747
Mitochondrial biogenesis [BR:
omm03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
135536747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
135536747
NCBI-ProteinID:
XP_064819070
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MRALKTKSQKMSLQTRDGLGSGGPVVDCRGLLENEGPVFESCFSEEPLPYSDPTGAAGGG
TCPPDSPNQENRLQAQRIRGQDSQRHTHTPQNRPHGNQSPDLPEGYEQRTTVQGQVYFLH
TQTGVSTWHDPRIPRDLASVSCEELGPLPAGWEVRSTVSGRIYFVDHNNRTTQFTDPRLH
TIISQHSQVKDSSQPLGGGGGREMEVGGGGEKGEVTLRYERDLVHKLKLLRHELSLQQPQ
AGHCRIEVSRDEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYLLCHEM
LNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGLAVFHSHYINGGFTLPFY
KQLLGKPIMLQDLETTDPELHKSLVWILENDISSVLDHTFCVEHSAFGKFLQHELKPNGQ
NLPVTEDNKKEYVKLYVTWRFMRGIEAQFLALQKGFSQLIPQHLLKPFDHKELELIIGGL
GKIDLADWKSNTRLKHCAVDSNVVCWFWEAVESFTEERRGRLLQFVTGSTRVPLQGFKAL
QGSAGPRLFTIHLIEANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETCGFAVE
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcgagctctcaagacgaaaagtcaaaaaatgagcctccagaccagagatggtttgggc
agcggaggacccgtggtcgactgtagaggactgttagagaatgaggggcctgtgtttgag
agctgtttcagtgaggagccgctgccgtactcagaccccacgggtgccgctgggggcggg
acctgtccaccggattcacccaaccaggagaaccggctccaggctcagcgaatcagaggc
caggattcccaaagacacacccatacccctcagaaccgaccgcatggcaaccaatcacct
gatctgcctgagggatacgagcagcgcaccacggtgcagggacaggtgtattttcttcac
acacagacgggagtcagcacctggcatgacccacgcatacccagggacctggccagtgtg
agctgtgaggagttgggtccgctgccggccggctgggaggtgaggagcacggtgtcggga
cggatctactttgtggatcacaacaaccgaacaacgcagttcactgacccccggctacac
accatcatcagccaacactcccaggtgaaggattcgtcgcagccgttgggtgggggaggc
gggagagagatggaggtggggggaggaggggagaagggggaggtgacactgcgttatgag
agagacctggtccacaaactgaagctgctccgacacgagctgtcactacagcaaccacag
gccggacactgtcgcatagaggtctcacgagacgagatctttgaggagtcttatcgtcag
atcatgaagatgagacccaaggatctgaagaaacgactgatggtgaagtttagaggagag
gaaggactggactacggaggagtggcaagggagtggctgtatctgctgtgccatgagatg
ttgaacccgtactacggcctgttccagtactcaacagacaacatttacacactacagatc
aaccccgactcctctataaaccctgaccacctgtcgtatttccactttgtgggtcgtgtg
atgggcctggcagtgttccatagtcactatatcaacggaggcttcaccctgcccttctac
aagcagctgctggggaaacctattatgctacaagacctggagaccactgatcctgaactt
cacaagagcctggtctggatactggagaatgacatctcgtcggttctagatcatacgttc
tgcgtggaacacagtgccttcgggaagttccttcaacatgagctgaaacccaacggtcag
aacctcccggtaaccgaggacaacaagaaggagtacgtgaagctttatgtcacctggagg
tttatgaggggcatcgaggctcagttcttagctctgcagaaaggattcagccaactgatt
cctcaacacctcctcaaaccatttgaccacaaggagctggagttgataatcggaggcctg
gggaagatagacctagcagattggaagtctaacacccgtttgaagcactgtgctgtagac
agtaatgtggtttgctggttctgggaggctgtagagagcttcactgaggagaggagagga
cgactactgcagtttgttaccggttctaccagagttccactacagggattcaaggcacta
cagggttcagcaggcccaaggctgttcaccatccatctgatagaggccaacacagacaac
ctacccaaggcacacacatgttttaacagaatagatatccctccctacgagtcgtacgag
aaactttatgagaaactgctgacggccgtggaggaaacttgcggcttcgctgtggagtga
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