Oncorhynchus masou masou (cherry salmon): 135536752
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Entry
135536752 CDS
T10723
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
Ribosome biogenesis [BR:
omm03009
]
Eukaryotic type
90S particles
Other 90S particles
135536752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135536752
NCBI-ProteinID:
XP_064819073
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Position
5:complement(21053908..21079779)
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AA seq
1807 aa
AA seq
DB search
MAATEEDFPRGGKTKQTTESKAEPVRRHTEVDNLFETHTAEESKKRKGQKEGALKKAKRQ
RMSKEEALKLNTTTSVDILQLKSLKVGTLLLGCVKEVADFEVTINLPSGLLGYLNISNIS
DSYTKILSGHLDSASSEEIFSLHSLFSPGMLVRCLVARLDTAKGGSVSIQLSINPKEVNK
GLSTGSLKAGLILSGCVESIEDHGYLVDLGIKGTKAFLPKQAAKDKTNSPKELKVGQYVT
SLLEEVKNDGRVVRLSMSPTAVAQAVADTAHGWTLTSLLPGLLVKAQIKKVTPRGLILEF
LSSFTGLVDFMHLEPEQASTFNEGDSVKACILYVEPSTRLVGLSLRSHLLQPGGVVDLVA
TERIGEVAHGCKMTALHHLSGAMLELPDQTVVFVHRNHMKEPMEAFNLNRVMAKPEHTCR
IMDFIPMEQVHLVSLRQSIVDAPFFRRYHDIQPGQIVQGMVTSLQSHGMMVKVTDYIRGL
VPWTHLSDIILKNPEKKYTVGMPIKCRVLSVDPQEKKLILTRKRALIDSSLPPFLTYEDA
RRGRVSHGFIVCVKDFGCIVRFYGEVKGLVPPNELSTEPVVVPENMFYVGQVVKAKVLNC
DVEKEKLLLSFKAVAGGDTEGPPKPKFDFEVGKKVEVKVVSKVLTGLEVSILPEETTAFL
PVMHLSDHVSNCLLLWEGLEEGDIISNIVCLSEKKPNITLTKKPTLKSFLEEGGVVAKEF
SDITVGVQLIGWVKNIMPYGVFVEFPYGLVGLAPKAAMSDKFVSDTTSHFQLGHTVFAKV
TNLDEEKRRFLVSLKVSEVPSPEREGQARLIRGLQERKEVMEMMASRGDSDLLKQLSAVT
IGQRMKMSVDEVREDGSVTFKSDELSAATVLATKDHAPGKLATGQECMPVILHVDLVTSE
VYVSLLAKLTGKRKAVEAGSTHTATVQHADRDFAVISLGDTAQLTVIQTTNHLNETFRFD
SEKLTAGKTLTITVTKSSCEELEGLPLVSWKLAPPMSKRLISVSKGSKGTYRYGDVVKGK
VKTVKPTCVLVKLEDGSTGCVHVSEIQEVVCVGTFPTSLLKIGSEVTARVIGGREGNSHR
FLPFSHPNFTYSMPELSLLPRNLKEDADVKPVKTKEKLKRYQVGDDVICFVSKYFPKRKC
LEVTTGPSVTGTVEQLAMTSDPEGAKHPEKLFKLGQAVSAKVVTVNSSKPSRLSLSLNGV
HKLEKGHVIMGLVQKLDPNLGLLVKLPFNAMGTVAMEDLADKYKPKPLERYSKDQLVRCC
IVGEATSNWQLSLRSSRTNPEKALVVQDPEIVSLEDLSEGQIVRGYVRTVNAHGVFVSLS
RSIQGRAQFQKATKYFVASHQDYAKKVPQAKLLTTKILSVDKESGLVDLSLLQEDTGRPD
VLPESLGLNLRLTGEAKEKRDATKKRKRTESESKQGTAENILRKKTKGKGEDSDSGVEVY
FREEEEENKCEPAEVEKPVPVQPARLQVTGGFPWDAALSALKPAPAALGGEDSSDGEDGE
VNTKPQKKSHHEQEVEKREAEKALTKLETELMDPGLRPQTAASFERLLLGSPDSSLLWLQ
FMAFHLQATQIEQARGVAERALKTISFREEQEKLNVWVALLNLENLYGTEESLQKVFERA
VQYCEPMPVYQQLADIYAKCQKTKEAEGLYKTMVKRFRQEKAVWLSYGTFLLQQGQSDAA
SALLQRAIKSLPNKDNVDLIAKFAQLEFRYGDVERGKAMLDRILTSYPKRTDLWSVFIDL
MVKHGSQKEVRAVFDRVIHLSVAVKRIKFFFKRYLEYEKKSGTPESIQAVKGKALEYVES
KGTEAAR
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaacggaggaggacttccctcgtggaggtaaaaccaagcagaccactgaaagt
aaagcagaacctgtgagaaggcatacagaagtggacaatctgttcgagacacatacagca
gaggaatccaagaaaaggaagggacagaaagagggtgccttgaagaaagctaagaggcaa
aggatgagcaaagaggaggctctgaagctcaatacaacaacttctgtagatatcctacag
ttaaaaagcctgaaggtgggtaccctactgctgggctgtgtgaaggaggtggccgatttt
gaggtgacgattaacctgcccagcggccttttgggatacctgaacatttccaatatctcg
gactcgtacaccaagatactgagtggccacctggactctgcttcttcagaggagatcttc
tctctccacagtctcttctccccgggcatgttggtcaggtgtttggtagccaggttggac
actgccaaaggaggatcggtcagcattcagctgtcaatcaaccccaaagaggtcaacaag
ggcttgagtactggctctctgaaggctggcttgatcctgagtggttgtgtggagagtatt
gaggatcacggctacctggttgacctcggcatcaagggaaccaaggccttcctacccaag
caggcagccaaagacaaaacgaatagtccgaaagagctgaaggtgggccagtatgtgact
tctctgttggaggaggtgaagaacgatgggcgtgtggtccgtctgtccatgagccccacg
gcggtggcccaggccgttgcagacacagcgcacggctggacccttaccagcctgctgcct
ggtctactggtcaaggcccagatcaaaaaggtgaccccacgtggtctgattctggagttc
ctctcctccttcaccggcctggtggactttatgcacctggaaccagaacaggcctccaca
ttcaacgagggagacagcgtgaaggcctgcatcctttatgtggagccgtccacccggctg
gtgggcctgtccctgcgcagccacctgctgcagccagggggcgtcgtggacctggtggcc
actgagaggataggggaggtggcgcatggctgcaagatgaccgctctccatcacctgtct
ggagccatgctggagctgcctgaccagactgtggtgtttgtacataggaaccacatgaag
gagcccatggaggcgttcaacctgaaccgtgtcatggccaagcctgaacacacctgtagg
atcatggacttcatccccatggagcaggtgcacctggtcagcctgcgtcagagcattgtt
gatgccccgttcttcagaagataccatgacatccaacctggacagattgttcagggcatg
gtgacgtccctccagagccatggcatgatggtgaaggtgaccgactacatcagaggcctg
gttccatggacacacctctctgacatcatcctcaagaacccagagaagaagtacacagtg
ggcatgcccatcaagtgccgggtgttgtcagtggacccacaggagaagaagctgatccta
accaggaaaagggccctgatagattcctccctacccccattcctgacctacgaagatgcc
cgccgcggtcgcgtctcccacgggttcatcgtctgtgtcaaggactttggctgcatcgtc
cgtttctacggcgaagtcaaggggctggtgccccccaacgagctcagcacggagccagtg
gtagttcctgagaacatgttctacgttggacaggtggtgaaggctaaagtgctgaactgt
gacgtggagaaggagaagctccttctttccttcaaggcagtggcaggaggagacactgag
ggaccgcctaaacccaagtttgactttgaggttgggaagaaagtggaggttaaggtggtg
agtaaagtccttaccggtctggaggtgtccattctcccagaggagaccacggcctttcta
cccgtgatgcacctctccgaccacgtgtccaactgtctactgctgtgggaggggctggaa
gagggtgacatcatctccaacattgtctgcctcagcgagaagaaaccgaatattaccctg
actaaaaagcccactctgaagtcattcctggaggaggggggcgtggtggctaaggagttc
tctgacatcacagttggggtgcagctgattggctgggtcaagaacattatgccctacgga
gtgtttgtggagttcccctatggtctggttggcctggcccctaaagcggccatgagtgac
aagttcgtcagtgacacgacatctcacttccagctgggccatacggtgtttgccaaggtg
accaacttggatgaggagaagcgcaggttcctggtcagtctcaaggtgtcagaggtcccc
tcccctgagagagaaggccaggccaggctgatccgaggcctgcaggagaggaaggaggtg
atggagatgatggccagcagaggtgactctgacctactcaagcagctgtctgcggtgacc
ataggccagaggatgaagatgagcgtagacgaggtgagggaggatggaagtgtcaccttc
aagtcagacgaactcagcgcagccaccgtactggccaccaaggaccatgcgccgggtaag
ttggcgactggacaggagtgcatgccggtaatcctccacgttgacctcgtgacctctgaa
gtctacgtgtccctcttggctaaactgaccggcaagaggaaagcggtagaggcagggtcc
acacacactgccactgtgcaacacgccgaccgcgactttgccgtcatctcattgggcgac
acggcccaactgacggtcatccaaaccaccaatcacctcaacgaaacgttccgctttgac
tctgagaaactgaccgctggtaaaaccctgacgatcaccgtcaccaaatccagctgcgag
gaactagaagggctccccctagtgtcctggaaactcgcaccgcccatgagcaaaagatta
atctccgtctccaaggggtcaaagggcacgtatcgctacggcgacgtggtaaaggggaag
gtgaagacagtgaagcctacgtgtgtgctggtgaagctagaggacgggagcacggggtgc
gtgcacgtgtccgagatacaggaagtggtgtgcgtgggaacgttccccacgtccctcctc
aagataggaagtgaggtcacagcccgggtcatcggaggacgggagggcaacagtcacagg
ttcttgccgttctcccatcccaacttcacgtactccatgcctgaactctcacttcttccc
aggaacctgaaagaagacgcagatgttaagcctgtcaagaccaaagagaagctgaagcgt
tatcaggttggcgacgacgtcatttgctttgtgtcaaagtactttccaaagaggaagtgt
ctagaagtgactactggtccctcagtaactggaactgttgaacaactggccatgacgtct
gaccctgaaggtgccaaacacccagagaagctgttcaagctgggccaggcggtcagtgct
aaggtggtgacagtcaactcctccaagccctcacgcctctcattgtccctcaatggtgta
cacaagttggagaagggccatgtaatcatggggttggtgcagaagctcgatccaaacctg
ggtctgctggtgaagctgccattcaacgccatgggaacggttgccatggaggacctagcc
gacaaatataagccaaaacctctggagcggtacagcaaggaccagctggtcaggtgctgc
attgtaggagaggcgacgagcaattggcagttgtccctccgctcttcgaggacgaaccca
gagaaggccttggtagtacaggacccagagattgtgtctctcgaagacctgtcagagggg
cagatcgtcagaggctatgtgaggactgtcaatgcacatggagtctttgttagtttgtct
agatccatacagggcagagcccagttccagaaggccactaagtactttgtggcgagccac
caagactatgccaagaaagtaccgcaggccaaactgctcaccaccaagatcctcagcgtc
gacaaagaaagcgggctggtggatctgtctctgctccaagaggacactgggagaccagac
gtgctcccagaatccctggggctgaacctgcgcctgacgggagaggccaaggagaagcgt
gacgccaccaagaagaggaaacgcacggagtcggagagcaagcagggaactgcagaaaat
attttgaggaagaagacgaaggggaaaggagaggacagcgacagcggagtggaggtgtac
ttcagagaagaagaggaggaaaataagtgtgagcctgcggaggtagagaagcccgtccca
gtgcagccggccagactgcaggtgacaggagggttcccctgggatgcagcgctgagcgcc
ctgaaaccagcgcccgctgccctggggggagaggactccagcgacggggaggacggcgag
gtgaacactaagccccagaagaagtctcaccatgagcaggaggtggagaagcgggaggct
gagaaggccctgaccaagctggagacggagctgatggacccaggcctgcgaccccagacg
gcggctagctttgagcgcctgctactcggctcgcctgacagctctctgctctggctgcaa
ttcatggccttccacctgcaggccacacagatagaacaggctcgaggggtggctgagagg
gctctgaagaccatctccttcagagaagagcaggagaagctgaatgtgtgggtggctctg
ttgaacctggagaacctgtatgggacagaggagagtcttcagaaggtgtttgagcgagcc
gtgcagtattgtgaacccatgcccgtctaccagcagctggctgacatctacgccaagtgt
cagaagactaaggaggcggaaggtctgtacaagaccatggtgaagcggttccgtcaggag
aaggctgtgtggctgagctacgggaccttcctgcttcagcagggtcagagtgacgcggcc
agcgccctgctacagagggccatcaagagcctgccgaacaaagacaatgtggatctgata
gcgaagtttgcccagctggagttccgctacggagacgtagagcgaggaaaggccatgttg
gacaggatcctgaccagctaccccaaacgcaccgatctgtggtccgtcttcatagacctc
atggtcaaacacggctcccagaaggaagtccgggctgtgtttgaccgtgtgatccacctg
agtgtggcggtgaagcggatcaagttcttcttcaagcgttacctggagtatgagaagaag
agcggcacgccagagagcatccaggctgtcaagggcaaggctctggagtacgtggagtct
aaagggacagaggccgccagatag
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integrated database retrieval system
