Oncorhynchus masou masou (cherry salmon): 135537036
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Entry
135537036 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-18-like
KO
K16499
protocadherin delta 2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135537036
Cell adhesion molecules [BR:
omm04515
]
Cadherins
Protocadherins
135537036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
MpPF26
PAG
Motif
Other DBs
NCBI-GeneID:
135537036
NCBI-ProteinID:
XP_064819321
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MEPGQIICGFYIRIWILLAVMAVATQNVKGKTLKYQVYEEQKVGTVIGRLKEDLAAVLVK
LPSSVSLRFRTMQRGSTSFLSVREQDGEISIRSKIDREKLCEKNLNCSIEFDVLTLPTEH
LQLFHVEVEVLDINDNAPQFARAVIPIEISESAAVGARIPLDSASDPDVGENSLDTYSLE
PNNYFKIDIQSRTDGAKYSELVVLRELDREMQPGYELQLTASDKGVPPKSGSTLLRISVA
DSNDNSPIFEQSSYVIQLLENSPVGSLLIDLNATDADDGTNAKIVYSFSSHVSPKIVETF
KINSDNGHLTLMKRVDFESATSYDIDVQAQDMGPNSMPAHCKIFIKVVDVNDNKPDISIN
LMSQGDRGKEDAAHISEAAPLDSFVALVRVEDLDSGLNGEVVCKLHGQGSFKLQKTYENN
YMILTNVSLDREKRSEFSLTVIAEDRGTPSLSTIKHFTVHVLDENDNAPRFQKGRYEVFR
SENNAPGAYLTSLLATDPDLDANSQVSYFLVENSVHGSSISTFVTIDPSNGAVYALRTFD
REDISRISFVVQAKDAGEPSLLSNATVILTILDENDNPPVIVVPQLWNLTADVPVSKYTE
AGSLVTAVRATDRDTGVNAELTCSITAGNEEGFFSMDPRTCEISANVSLDMFPHEFAELT
VLVSDHGSLQQTTKAVLKXSLYENMEGHVQVLDQGETPLDASLIIIMSLGAICTMLLIIM
VMFAARCNREKKDTRNSYNCRVAETNHQHHPKKPSRQIHKGDITLVPTVNGTLPIRAHHR
SPSATPXMDRAPMGSRQSHHSHQSLNSLVTISSNHIPESFALELAHATPPVEQVSQLLSM
LHQGQYQPRPCFRGNKYSRSYRYALQDMDKFSLKDSGRGDSDAGDSDYDMGRESPIDRLL
GDGFSELYHLDMLHRLHPAMRLCTEECRVLGHSDQCWMPPPGPLPVLPGLLLL
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggaacctggacaaataatctgcggattttatatccgaatatggatacttctcgccgtt
atggcagtggccacgcaaaacgtcaaaggtaaaacgttaaaatatcaagtttacgaggaa
cagaaggtggggactgttattggacggcttaaagaagacctggctgcggttttggtcaaa
ctcccaagttctgtgtctttgcgtttccgaaccatgcagagaggtagcacgtctttccta
tccgtgcgcgagcaggacggagagatcagcatccgttccaaaatagacagagagaagctc
tgcgagaagaacctcaactgttccattgaattcgatgttctgactcttccaacagaacac
ttgcagctcttccacgtcgaagtggaagtgttggacattaatgataacgcgccccagttc
gcccgcgccgtaatccccatcgagatctccgagagcgcggcagttggggcgcgcattccc
ctggacagcgcgagtgaccccgacgtcggggagaactccctcgatacttactccctcgag
cccaacaactacttcaagattgacattcagagcagaacggacggggctaagtactcggag
ttggtggtgctaagggagctcgacagggagatgcagccaggttatgaacttcagctgacg
gcctccgataagggcgttccccctaaatcaggttctactctcctcagaattagcgtggca
gattcaaacgacaacagtcctattttcgaacagtcttcatatgtgattcagctattggag
aattcacctgttggatctcttcttattgacctgaatgcgactgatgcagacgacggaacc
aacgccaaaatcgtctactcctttagcagtcacgtgtccccgaaaatcgtggaaacgttc
aagatcaactcagataacggccacctgacgctcatgaagcgcgtggactttgaaagcgcg
acatcatatgacatcgatgtccaagcccaggatatgggccccaactccatgccagcacac
tgcaagatcttcatcaaggtagtggacgtaaatgacaacaaaccagacatcagcatcaat
ctgatgtcccaaggggacagaggcaaggaggacgcagcccatatctcagaggccgctcca
ttggattccttcgtggccttagtaagagtggaggacctagattccggtctgaacggagag
gttgtgtgtaaactccatggccaggggagttttaaactacagaagacgtacgagaacaac
tacatgatcctcactaacgtctcgctggatcgggagaagaggtcagagttcagcttgacg
gtcatcgccgaggaccgcggcacgcccagcctctcgaccatcaagcacttcacggtgcat
gtgctggatgaaaacgacaacgctccacgcttccagaagggacgctatgaggtattcaga
tcagagaacaacgcccctggggcctacctcacgtcgctattggcaaccgaccccgacctg
gacgccaacagccaggtgagctacttcctggtggagaacagcgttcacgggagctctatc
tccacctttgtcaccatagacccatccaacggtgctgtttacgccctccgcacgttcgac
cgcgaggacatcagccggatatccttcgtagtccaggccaaggacgccggggaaccctcg
ttgctgagcaacgccaccgtcatcctgacaatcctagacgaaaacgacaacccgccggtc
atcgtggttccgcagctctggaacctcacggccgacgtccccgtctccaagtacaccgag
gccggtagcctggttaccgctgtcagggcgaccgaccgagacaccggcgtcaacgcagaa
ctcacatgttcaatcactgccggcaacgaggaaggcttcttctctatggatcctagaacg
tgcgagatcagcgccaacgttagcctcgacatgtttccccacgagtttgcggagctcacc
gtcctggtcagtgaccacggttccttgcaacagaccaccaaggccgtcctaaaantcagc
ctctatgagaacatggagggccacgtgcaggtgctggaccagggggagacgccgctcgac
gcctccctcatcatcatcatgtccctgggggccatctgcactatgctcctgatcatcatg
gtgatgttcgccgcccgctgcaaccgagaaaagaaagataccaggaactcatacaactgc
agggtggcggagaccaaccaccagcatcaccctaagaaaccgtcgcggcagatccacaag
ggtgacattacacttgttcccacggtgaatgggactctaccaatcagagcgcaccaccgc
tcaccctcggccacgcccnccatggaccgggcgccaatgggaagccggcagagccaccac
agccaccagtcactgaatagcctggtgacgatatcgtccaatcatatcccggagagcttc
gccctggagttggcccacgctacgccacccgtcgagcaagtctcacagcttctgtccatg
ctccatcagggtcagtatcagcctcgaccctgtttccgtggcaacaaatactccagaagc
tacaggtatgcattgcaggacatggacaagttcagcttgaaggacagtggtcgtggggac
agcgatgcgggggacagcgactatgatatgggacgagagtcccccatcgaccgtctgctg
ggggatggcttctctgagctctaccacctggacatgctccacagactacacccagctatg
cgcctatgcactgaggagtgtcgtgtgttgggccattctgaccagtgctggatgcctccc
cctggccctctccctgtcctccccggcctcctcctcctctga
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