Oncorhynchus masou masou (cherry salmon): 135537536
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Entry
135537536 CDS
T10723
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omm03009
]
135537536
Enzymes [BR:
omm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135537536
Ribosome biogenesis [BR:
omm03009
]
Eukaryotic type
90S particles
Helicases
135537536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
SecA_DEAD
XdhC_C
Motif
Other DBs
NCBI-GeneID:
135537536
NCBI-ProteinID:
XP_064819743
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MDAFDLFRKLGAGAKFDFKRFGKDAERFKVVRSQEKDVSDHYGIDFFGTGTTHGNQEQRA
EEKQDEEGEVDAAAGKRKRQDEEKTAKKKKKDSQAEVACEETEGILWTSSADRKSKGLRE
GRDRDKTSMKRLQHLHQEKVNRVRMQHRINVHGCDVPDPVCTFSELQSEYDLNPRVLQNL
SAAGLTIPTPIQMQAIPLMMHGRELLACAPTGSGKTLAFCLPLLTHLKQPANLGIRALVI
SPTRELASQTHRELVRLSEGVGFRVHILDKASITAARKYVPSSHKKSDILISTPNRLVFL
LKQDAIDLSSVEWLVVDESDKLFEDGRSGFREQLAAVFQACSSPRVRRALFSATCAPDVE
QWSRLNLDNLVSVNIGHRNSAVETVEQELLFVGTENGKLLAVRDIIKKGFLPPMLVFVQS
IDRARELFHELVYEGINVDIIHADRTQQQRDNVISSFRSGDIWVLICTALLARGIDFKGV
NLVLNYDFPTSAVEYIHRIGRTGRAGRTGRAVTFFTEDDKPLLRSIANVIKQAGCPVPGY
MVGFKKIHSKVKRQLQKKPPKRSTIRTTPQFVLKKGRGGEKTGGGAEGGLGGPKKGADGQ
TKGDKGQKSPAGVQSKVQGMRKKKKGKKN
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggacgccttcgacttgtttcgtaaactcggagccggagcgaaatttgatttcaagagg
tttggtaaagatgccgaacgatttaaggtggtgagatctcaagagaaagatgtatctgac
cactatggaatcgacttcttcgggaccggaacaacccacggcaaccaggagcagagagcg
gaggagaagcaagacgaggagggagaggtcgatgctgctgcagggaaaaggaaacgacag
gatgaggagaagactgcaaagaagaaaaagaaagattctcaggctgaagtggcgtgtgag
gagaccgagggcatcctgtggacctcctctgcagacaggaagtctaaaggcttgagggag
gggagggacagagacaagacatctatgaagagactccaacacctccaccaagagaaggtg
aaccgtgtccgtatgcaacatcgtatcaacgtgcatggctgtgacgtgcctgacccagtg
tgcaccttctccgagctgcagtccgagtacgacctgaacccacgcgtcctccagaacctg
tccgcagctggactcaccatacccacacccatccagatgcaggctatacccctgatgatg
catggtcgtgagttgttggcgtgtgctccgacaggatcggggaagactctagcgttctgt
ctccctctcctcacacacctgaaacagcctgctaacctcggcatcagagctctggtcatc
tctcccaccagggaactggccagccagacccacagggagttggtgcgtctgtcggagggc
gtcgggttcagagttcacatactagacaaggcctccattactgcagccaggaaatacgtt
cccagctctcacaagaaatctgatattctgatcagtacccccaatagactggtgttcctc
ctgaagcaggatgctatagacctcagcagtgtggaatggttggtggtggatgagagcgat
aagctgtttgaggatggtcgtagtggcttcagagagcagctagcagcagtgttccaggcg
tgttcctctccacgggtcagacgagcgctcttcagtgctacctgtgctccagacgtggaa
cagtggtctcgcctcaacctcgacaacctggtctctgtcaacattggacacaggaactct
gcagtagagacagtagaacaggagctgctgtttgttggaacggagaacgggaagttactg
gccgtgagggacatcatcaagaagggtttcttgccccctatgctggtgtttgtccagtct
attgatcgagccagagagctcttccatgagctggtgtacgaaggcatcaacgtagacatc
atacacgctgaccgcacacagcaacagagagacaacgtgatcagtagtttccggtcgggt
gatatctgggtgttgatctgtacggccctgctggcccgaggtatcgactttaagggtgtc
aacctggtgctgaactacgacttccctaccagcgctgtggaatacatccaccgtatcggt
cgtactggcagggcgggacgcacagggagagctgtcaccttcttcaccgaggatgacaag
cctcttctacgcagtattgccaatgtgatcaaacaggccggttgtcctgtccctggctac
atggtaggctttaaaaagatacacagtaaggtaaaacggcagctccagaagaaaccgccg
aagaggagcactatccgtaccacgcctcaatttgtactgaagaagggaagaggaggagag
aagacgggaggaggagcggaaggaggactgggaggcccaaagaaaggagctgacggacag
acgaagggagataaaggacagaagtcgcctgctggagtccagtctaaggtccaggggatg
aggaaaaagaagaaaggaaagaagaactga
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