Oncorhynchus masou masou (cherry salmon): 135537925
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Entry
135537925 CDS
T10723
Name
(RefSeq) cullin-4A-like isoform X1
KO
K10609
cullin 4
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03420
Nucleotide excision repair
omm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135537925
09124 Replication and repair
03420 Nucleotide excision repair
135537925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135537925
03400 DNA repair and recombination proteins [BR:
omm03400
]
135537925
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omm04147
]
135537925
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
135537925
DNA repair and recombination proteins [BR:
omm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
135537925
TCR (transcription coupled repair) factors
Cul4-CSA complex
135537925
Exosome [BR:
omm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
135537925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
135537925
NCBI-ProteinID:
XP_064820006
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MAEDIRQDKKANFSALTEHNNNGVTKISGLASNKTGASKKLVIKNFKDRPKLADNYTEDT
WLKLRDAVGAIQNSTSIKYNLEELYQAVENLCSYKVSPTLYKQLRQVCEDHVQAQIHQFR
EESLDSLSFLKRMNRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRSHI
VSDGAVQVRTVDGILEQIERERNGETVDRSLLRSLLGMLSDLQVYKESFEERFLMETNRL
YAAEGQRLMQERDVPEYLHHVARRLEEENDRVISYLDQSTQKPLISNVEKQLLGEHMTAI
LQKGLSILLDGNRVMELALLYQLFSKVKGGLPTLLQHWRDYIKSFGGEIVGTPEKDKDMV
QDLLDFKDKMDNVAQGCFNRNESFINAMKEAFEAFINNRPNKPAELIAKYVDCKLRAGNK
EATEEEMERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHE
CGAAFTSKLEGMFKDMELSKDVMIQYKQYTQNQSEPSQLELTVNILTMGYWPSYTPMEVH
LPPEMVKLQEVFKLFYLGKHSGRKLQWQPTLGHAVLKTEFKEGKKELQVSLFQTLVLLMF
NEGEEFSVEEIKSATGIEEGELRRTLQSLACGKARVLNKSPRGKDIEDGDRFNFNNDFRH
KLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLGHNLLVSELYNQ
LKFPVKPGDLKKRIESLIDRDYMERDKESPNQYHYVA
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagacatacggcaggacaagaaagccaacttctctgctctgacggagcacaac
aacaacggagtgacaaagatttctggcctggcctccaacaaaactggcgcctccaagaaa
ttagtcataaaaaatttcaaagacaggccaaagctagcggacaactacactgaggacacc
tggctgaagttgagggatgcggtaggagccatccagaacagcacctccatcaagtacaac
ctagaggaactctaccaggcggtggagaacctgtgttcctataaagtctcccccacactg
tacaagcagctccgtcaggtctgtgaggaccatgtccaggcccagatacatcagttcagg
gaagagtccctggacagcctgtctttcctgaagaggatgaaccgatgttggcaggaccac
tgcagacagacgatcatgatccggagcatctttctgttcctggatcgtacctatgtgctc
cagaactccctgctcccctccatctgggataccgggctggaactcttccggagccacatc
gtgagcgacggggctgtccaggtgcgcacggtcgacgggatcctggaacagatcgaacgc
gaacgcaacggagagacagtggaccgcagccttctccgcagcctactgggcatgctctca
gacctgcaggtgtataaagagtcctttgaggagcgttttttgatggagactaacagactg
tatgctgcagagggacagaggctgatgcaggaacgagacgtgcctgagtatctgcatcat
gtggctcgtcggttggaagaagagaacgatcgtgtcatcagctacctcgaccagagcact
cagaagccacttatctctaatgtagagaagcagctgcttggagaacacatgacggccatc
ttacagaaaggtctcagtattctgttagacggtaaccgggtgatggagctggctctgctc
taccagctcttcagtaaggtgaagggaggactccccactctgctgcagcactggagagac
tacatcaagagttttggtggtgagattgtgggcaccccagagaaagataaggacatggtt
caagacctgttggactttaaggataagatggacaacgtggcccagggctgtttcaacaga
aacgagagcttcatcaacgctatgaaggaggcctttgaagctttcatcaacaacagaccc
aacaaacctgctgaactcatcgcgaagtacgtggactgtaaattgagggcgggcaacaag
gaagctaccgaggaggaaatggagagaattctagacaagatcatgatcatcttccgcttc
atccacgggaaggatgtgttcgaggccttttataagaaggacctggccaaacgcctgctg
gtggggaagagtgcctccgtggacgctgagaagtccatgctgtccaaactcaaacacgag
tgtggagcggccttcaccagtaagctggaggggatgtttaaggacatggagctctccaaa
gacgttatgatccagtacaagcagtacacccagaaccagagtgagcccagccagctggag
ctgacggtcaacatcctcaccatgggctactggccctcctacactcctatggaggtgcac
ctgccccctgagatggtgaagctccaggaggtattcaagctgttctatctggggaaacac
agtggcaggaagctccagtggcagcccaccctgggccacgctgttctgaagactgagttt
aaagagggtaagaaggagctgcaggtgtctctgttccagacgttggtgctattgatgttc
aacgagggggaggagttcagcgtggaggagatcaaatcagccactggcatagaggagggt
gagttgaggcgtaccctgcagtctctggcctgtgggaaggcgcgcgtcctcaataagagt
ccccgggggaaggacatagaagacggagaccgcttcaacttcaacaacgacttcagacac
aaactgttccgcatcaagatcaaccagattcagatgaaggaaacggtagaggagcaggtg
agcaccacagagcgtgtgtttcaggacagacagtaccagatcgacgcggccgttgtccgc
atcatgaagatgaggaaaaccctgggccacaacctgttggtgtcggaactatacaaccag
ctcaagttccccgtcaagcctggagacctgaagaagcggattgagtcgctgattgacaga
gactacatggagagagacaaggagagtcccaaccagtaccactatgtggcctga
DBGET
integrated database retrieval system
