Oncorhynchus masou masou (cherry salmon): 135537995
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Entry
135537995 CDS
T10723
Name
(RefSeq) nuclear pore complex protein Nup133-like
KO
K14300
nuclear pore complex protein Nup133
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135537995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135537995
03036 Chromosome and associated proteins [BR:
omm03036
]
135537995
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135537995
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
135537995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
135537995
NCBI-ProteinID:
XP_064820071
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All DBs
Position
5:25785124..25802188
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AA seq
1139 aa
AA seq
DB search
MFSPRPTPCSGRRQSSRVTGRKSLAGTPTGLLFSPRRTSLAARSTPTRVQSYSTSEALHF
DVQTFGSSLPVKVMEALTMADADDQISVKVDESGWAWMVCGERLIIWKICQTAVAKLSVC
KGLQLPTSEFVYYADLISISSPSPLETATVQSISVMAVAPEGTARFWPSLAHEGNYAETV
VDMGENLCNFVVAVRGGSFIVSSYKGQLMRIGADPSGKPLQRALQQGQGVLSGIGRRVSS
LFGMRAPLTNNNLHSVLWVGEPGCLYTLTSCGLSKWEVDEVTEHQVLSWDSSRALTESVA
DAIWGSESNYEEIKEGVNVTYMDMQLSQDGLVVLAAAWHPSDSPCLSYFCLVTLLDNGNN
ISEELSVEVTKYNPPFQSEDALQAMRLLLPLASSPAAFLYNEELVFACSTGTGRGLPEEK
IPFNTPGDCLRGGGCCANLPVFFSQNSGLVAVVARESASMLPETMEDSLCFSLAGAGPEA
TAMETPTRMEPVAQEDKTKLLKAAFLQFCRNDLVGAQNMTDELFPPEGDGDEEVSGELDL
VVTRINLDLVDDYPASDPRWAESVPDESAGFPLTSLIILHQLEDKMKAHGCFMDFLLQVG
LLDRLGQTAVRSSPMATRLLLCEHAEKLQAAMTLKNHHAKHGELVNRAILIALRKSNATV
STSLTAADVFFREVSQISSVFECLLEEEERTLKENPVDSVKWAEVVLSVNTIIKDMLQAA
GQYRDTKASLYRASESTTAEPEYIPWTASSGLGGVRTVIARQHEVILRDVYPHADSEMRN
GLNEQLTALLDVLLGGYVAQLTSLRPGCPGQQDHYNTLEMEYTQRRSELLAPLLELGQYQ
WVAALAEKYCDFDILVQMCEQTDNQNRLQHYMAKFADQNFADFLFRWYMEKGKRGKLLSQ
PIAQHQQLASFLQSHEHLSWLHHIHVHDFSSAHNTLYGQANMETRYFVKKKTLLALSKLT
ALASDMPEAVMKKHVDDMVEQERFLLHQETLPKQLLEEKQQNPDTMPLLSAHNLINLYIC
DDNRRANEYDFKKALDLLEYIDEEDAVDIEGLKCEIFCKALKKDDWSSADGNDDPLEAAK
DSIFVKILLKLIQEGVPLQTYLPDFKDLLQLDEMEALKSKPTFEFVMRANYEHYLQAQI
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgtttagccctcgccccaccccttgttcaggccgaaggcagtcctcaagggtcaccggt
agaaagagtctagccggtacacctacagggcttctcttttccccacgtaggacgtcgtta
gcagcgagatcaactcccacgcgtgtgcagagctactcaacttcagaagcactccacttc
gatgtccagacgtttggctcttctctacctgtcaaagtcatggaggctttgactatggct
gatgctgatgaccagatctctgtgaaggtggatgagagtggctgggcctggatggtgtgt
ggagagagactgatcatctggaagatctgccagactgctgttgcaaagttgtcagtatgt
aagggcctccagctgcccactagtgagtttgtctactatgctgacctcatctcgatatca
tctcccagccctctggagactgccactgttcagtctatctctgtcatggcggtggctcca
gagggaacagcccggttctggcccagtttggcccacgaggggaattacgctgagactgtg
gtcgacatgggcgaaaacctctgcaactttgttgtggctgttagggggggtagtttcatc
gtgtcatcctacaagggccagttgatgcgcatcggggcggacccctccggaaagccgctg
cagagggcgctacagcagggccagggggtgctctccggcatcggacgccgcgtctccagc
ctgtttggcatgcgcgccccgctcaccaacaataatctccacagtgttctgtgggtggga
gagccgggctgcctgtatactctgacctcctgtgggctcagtaaatgggaggtggatgag
gtcacagagcaccaggtcctcagctgggactccagccgcgctctgacggagagtgtcgcc
gacgccatctgggggtcagagagcaactatgaggaaatcaaggagggagtgaacgttacc
tacatggacatgcagctgagccaggatggcctggtagtgttggcagcagcctggcacccc
tcagactccccctgcctatcctacttctgcctggtcaccctgctggacaacggcaataac
atctctgaggagctctctgtggaggtcaccaagtacaacccccctttccagagtgaggat
gccctccaggccatgaggctgttgttaccactggcctccagccctgctgccttcctgtat
aacgaggagctggtgtttgcctgctccactggtaccggcagaggtctacctgaggagaag
atccccttcaacacacctggtgactgtctgcgtggtgggggttgctgtgccaacctgccg
gtgttcttctcccagaacagtggtctggtggccgtggtggccagggagagtgcctccatg
ctgcctgagaccatggaggactccctctgcttctccttggctggggctggccctgaggca
actgctatggagactccgactaggatggagcctgtagcgcaagaggacaaaaccaaactc
ctaaaagcagcgttcctgcagttctgcaggaatgacctggtgggggcccagaacatgaca
gatgagctgttccccccggagggggacggagacgaggaggtgagcggggagctggacctg
gtggtgacccggatcaacctggacctggtggacgactacccagcctcagacccccgctgg
gccgagtctgtccctgacgagagtgctggcttccctctgacctccctcatcatcctccac
cagctagaggacaagatgaaggcccacggctgcttcatggacttcctgctacaggtgggt
ctcctggaccggctgggccagaccgcggtgcgctcgtctcccatggcgacgcgcctgttg
ctgtgtgaacacgcggagaagctacaggcggccatgacgctgaagaaccaccacgccaag
cacggcgagctggtcaatcgcgccatcctcattgccttgaggaagagcaacgcaaccgtg
tccaccagcctcacggccgcagacgtcttcttcagagaggtgtctcagatctcctcagtc
tttgagtgtctactggaagaggaggagaggactctgaaggagaaccctgtggactctgtg
aagtgggctgaagtagtgctcagtgtcaacaccatcatcaaggacatgctgcaggctgct
ggtcagtacagagacaccaaggcctcactgtacagagcctcagagagcaccactgctgag
ccagaatacatcccatggaccgcctctagcggtctgggcggtgtgcgtaccgtcatcgcc
cgccagcacgaggtgatcctgcgtgacgtgtaccctcacgccgactcggagatgcgcaat
ggcctgaacgagcagctgacagcactgctggatgtgctcctgggaggctacgttgcccag
ctgacctcactgagaccaggctgtccgggccagcaggaccactacaacaccctggagatg
gagtacacgcagcgtcgctctgagctgctcgcaccactgttggagctgggtcagtaccag
tgggtggcggcactggcagagaaatattgtgactttgacattctggtccagatgtgtgag
cagactgacaaccagaatagactgcagcactacatggccaagttcgccgaccagaacttt
gcggacttcctgttccgctggtacatggagaagggaaagcggggcaagctgctctcccag
cccatcgcccagcaccagcagctggccagcttcctgcaatcccacgaacacctcagctgg
ctgcaccacatccacgtacatgacttcagcagtgcccacaacactctgtatggccaggcc
aacatggagacacgttactttgtgaagaagaagaccctgttggctctcagtaaactgact
gccctggcatcagacatgcctgaggctgtgatgaagaaacatgtagacgacatggtagag
caggagcggttcctgctgcaccaggagactctgcccaaacagctgctggaggagaaacaa
cagaacccagacaccatgcccctgctcagcgctcacaaccttattaatctgtatatttgt
gatgacaaccgacgagccaatgagtatgacttcaagaaggctctggatctactggagtac
atagacgaggaggatgctgtggacattgagggactcaagtgtgagatcttctgcaaggcc
ctcaagaaagatgactggtcgtctgctgatggaaacgatgaccctctggaggcagccaag
gacagcatctttgtcaagatcctcctcaagctcatacaagaaggtgttcctctacagacc
taccttcctgacttcaaagaccttcttcaactggacgagatggaggctttgaaatcaaag
cccacttttgagtttgtaatgcgggccaactatgaacattacctgcaagcacagatctga
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