Oncorhynchus masou masou (cherry salmon): 135538165
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Entry
135538165 CDS
T10723
Name
(RefSeq) LIM domain only protein 7-like isoform X1
KO
K06084
F-box protein 20
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
135538165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135538165
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
135538165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
DUF4757
LIM
PDZ_6
PDZ
PDZ_2
LbR_Ice_bind
Motif
Other DBs
NCBI-GeneID:
135538165
NCBI-ProteinID:
XP_064820207
LinkDB
All DBs
Position
Unknown
AA seq
1443 aa
AA seq
DB search
MEWREQTSVTCEDAFPEAQRWMEEVTNKSFGSNNFRSALENGVLLCHLINRLKPGLIKRV
NTLSTPMAGLDNVNVFLRACGTLGLHEAQLFHPGDLQDLSTRATLRCAESKRRLRNVLIT
IYWLGRKAQADPFYSGPQLNLKAFEGLLGIALSKALEETPRGSVTDRDDSDVIYPERDDE
LLPLTRSQTPGYSREDSVESLNSALSFDSAESRTLSCISDSILRAGSEDSSSDLEAENSF
RMKAAEGRESGLRTWGNAPFQRKKCEEKRIKGCLPSPLTRNLEVNPGWIWSKSLNDIRRF
PSPTQVVRQVSEGGMELSPSAVSQDQLQMVRARVHDSEAKWHNDLTKWKLRRHRSNCDLR
RKMQERDNIVLMANAGVGTFKSLQEDREEDEEALCSNVHKVSPSTSFKEGSLELRPHTKA
PTSFKEGSLELRPHTRAPTSVKEGSLELRPHTKAPTSFKEGSLELRPHTKAPTSFKEGSL
ELRPHTKAPTSFKEGSLELRPHTRAPLALSASVESPYSPGASEPFTAPSVPLQGPGAVPQ
SEPLVLGGRSHTPVEPDGAGGSATFPNSASPVSSQAQTVSSQAQTVSSQAQTVSSQAQTV
SSQAQTVSSPALFISTGRDHNVSLLSNGIPTTLPGSSSSLTTGTSSCPTTSDPMNGTGSN
RTSGTGSPSVSMEIPDHALLSTVESLTSVGAPGHVSAPQQQELPLYRYSSRAPGGRGRVS
ASLPRGYRRSEGSSSCLSAGFTPRPFGAKSSRVSSLPRLYNLENSLLNENGNGSLLPTKT
APARPQKMVTISEVAVRAQPWATANQSSVNQEVEEGGSHTQPSILKTRGVPGPATHPKPS
QQGPLPPSLLPSLPVSVRQNGSAQVRHSDRVSLTLKIKSQPHFGFNTHWDSTGARVGGIQ
PGSPAELCQLRAGDEIVSVGGHRVAEMSHSQWKGMMTSALQKGSLTMDVQRYGPTDTSGD
ATMVKLAQINGQEVLTSKSRKGGFQDSPLTVRSREHDLLVLKTQKRRAEFFNQEGGSASA
ISDLQVPSLSTSPSSWSWDPEEERRRQEKWQEEQERLLQEKYRQDQERLDAEWQQAQEEA
GVEGYRQAEVTPDPLPPRCIVGYVVPCVKSSTPNMESSGEMTNGIAGLASPQPALSQPMP
PVAHVASNQKKEVVFDGERREEPLPQEGRNLEEETEVAEGDNWSGDSYGFTQLSIADRMK
SKSSPSLAGFHRQEVKGAAREVARRKPPQSMSLVEAERQQILEEMRKRTALLTDSSWIRQ
RSTSDNKQPTNRRGPMRRYDSLDNLPSSTTLLSNPQRPHSSLGFSAPYRPPSSRHSVGVA
LGGYTIGTQKHSPTWPRPFSTSSPPPNTGEEPATGESRPVSQQHHRVLTSRQVCSVCVCP
MGRGAAMVIETLNLCFHLACFQCVDCRCRLGGSEVRAQIRIRNGKPYCDPCYIRLKSHLA
TSL
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgagaacagaccagtgtgacctgtgaagacgccttccctgaggctcaacgg
tggatggaggaagtgacaaataaatcattcgggagcaacaacttccgctctgctctggag
aatggagtcctgctctgccatctcatcaaccggttgaaaccaggcctcattaagagagtg
aacaccctgtctactccaatggctggactggacaatgtgaatgtgtttctgagagcgtgt
ggtacactcggtctacacgaggctcagctgtttcatcctggagacctgcaagacctgtcc
acacgcgctacactcaggtgtgcagagagcaaaaggaggctgagaaacgttctaatcacc
atctactggctgggtcggaaggcccaggcggatcccttctactctggccctcagctcaac
ctcaaagcattcgagggactcctgggcatcgctctgtccaaggctctagaagaaaccccc
agaggcagtgtaacagacagggacgacagtgatgtgatctacccagagagggatgatgag
ctgctgcctctaacccggtcccagacacccggctacagcagagaggactccgtagagagc
cttaactcggccctgagctttgactcggcggagtcccgtaccctcagctgtatctctgac
tccatcctgagggccggaagcgaagactccagcagtgacttggaggcagagaactcattt
aggatgaaggcggcggagggcagagaatcgggactgaggacctggggcaacgcacccttc
cagaggaagaagtgtgaggaaaagcgaattaagggctgcctcccgagccccctcaccaga
aacttggaggtaaatccaggatggatatggagcaaatcgttgaatgacatcaggcggttc
ccgtcgcctacgcaagtggtgcgccaggtttctgagggtggcatggagctgagccccagc
gccgtgagccaagaccagctgcagatggtcagagcccgggtccacgatagtgaggccaag
tggcacaacgacctgaccaagtggaagctccggcgacacaggtctaactgtgacctccgg
aggaagatgcaggagagggacaacatcgtcctcatggccaacgccggggtcgggacattc
aagagtctgcaagaggacagggaagaggatgaggaggccctatgcagcaatgtccacaag
gtctctccgtccacttcgttcaaggagggttccctggagctccgaccccacaccaaagcc
cccacctcgttcaaggagggttccctggagctccgaccccacaccagagcccccacctcg
gtcaaggagggttccctggagctccgaccccacaccaaagcccccacctcgttcaaggag
ggttccctggagctccgaccccacaccaaagcccccacctcgttcaaggagggttccctg
gagctccgaccccacaccaaagcccccacctcgttcaaggagggttccctggagctccga
ccccacaccagagctccgctggccctcagcgcctccgtagagtcaccctacagccccgga
gcgtcggaacccttcaccgcccccagcgtgcccctccagggacccggagccgtgccccaa
tcagagcccctcgtcctaggggggaggagtcacacaccggtggagccagacggagctgga
ggatcagccactttccccaactctgcctcccccgtctcctcccaggcccagaccgtctcc
tcccaggcccagaccgtctcctcccaggcccagaccgtctcctcccaggcccagaccgtc
tcctcccaggcccagaccgtctctagcccagcgctcttcatctccactggacgagaccac
aacgtctccttgctctcaaacgggatcccgacgaccctccctggatctagctccagtctt
actactggtaccagttcttgtccaacgacctctgacccgatgaacggtaccggctctaac
cgaaccagcggtactggcagcccctctgtctccatggagatcccagaccacgccctcctc
tctactgtagagtccctgacctcggtgggagccccgggtcatgtctcagctccccagcag
caggagcttcccctctacaggtacagctccagggctccgggaggaagaggaagggtctct
gcctctctccccaggggataccgtcggtctgagggctcttcgtcctgcctctctgccggc
ttcaccccccggccgtttggagccaagtcctccagagtgtcctcactacccaggctctac
aatttggagaactctctgctgaatgaaaatggaaacggttccctgctccccaccaagact
gctcccgcccgcccccagaaaatggtcacgatctcggaggttgctgtcagggctcagccc
tgggctacagccaatcagagcagtgtgaaccaggaagtagaggagggtgggagtcacacc
cagccctccatcctgaagaccagaggggttcctggacctgccacccaccccaaacccagc
cagcagggacccttacccccttctctcctgcccagcctccctgtctcagtcagacagaat
ggctctgcccaggtacgtcacagtgaccgggtgagtctcaccttgaagattaaaagccaa
cctcactttggtttcaacactcactgggactcgacaggagcaagagtcggaggcatccaa
ccaggtagtcctgcagagttgtgccagctccgtgcaggtgatgagatagtgtctgttggt
gggcacagggtggcagagatgagccacagccagtggaagggcatgatgacctctgccttg
cagaaaggcagtctcaccatggatgtacagcgctatggtccaactgataccagcggagac
gcaacgatggtgaaactggcccagatcaacggacaagaggtgctgacctctaagagcagg
aagggaggttttcaggacagtcctctgactgtcagaagtcgagaacatgatctgcttgtt
ttgaaaacccagaaaaggagagcagagttctttaatcaggaaggaggatcggcgtcggcg
atatctgatctccaggtgccgtccctcagcacctccccctccagttggtcctgggaccct
gaggaagagaggaggaggcaggagaagtggcaggaggagcaggagcgcctcctacaggag
aagtaccgtcaggaccaggagaggctggatgctgagtggcagcaggcccaggaggaggca
ggggtggagggatacaggcaggctgaggtgacccctgatcctctaccacccagatgcatc
gtgggatatgtagtcccttgtgtcaaatcatccacaccgaacatggagagctcaggagag
atgaccaatgggatcgctggccttgccagtcctcagccagccttgagccagcccatgccc
cctgttgcccatgtggcatccaatcaaaagaaggaagttgtttttgacggggaaagaagg
gaggagcctctccctcaagaagggaggaacctggaagaggagactgaagtggcagaagga
gataattggtctggggactcctatggtttcacccagctatctatagctgacaggatgaaa
tccaagtcctccccatcgttggcgggtttccacagacaggaggtgaaaggcgctgctagg
gaggtggcgaggaggaagcctcctcagagcatgtcgttagtggaggctgagagacaacag
atcctggaggagatgaggaagaggaccgctctgctgaccgacagcagctggatacgacaa
cgctccacctcggacaacaaacagccaactaaccggcgagggccaatgaggaggtacgac
tctctggacaaccttccctcttccaccaccctgctctctaacccccaacgcccccactcc
tccctgggtttctccgccccgtaccgccccccctcctcccggcacagcgtgggtgtggcc
ctggggggttacaccatcgggacccagaaacacagccctacctggccccgccccttcagc
acatcttcccccccgcccaacaccggagaggaacccgcaaccggcgaatcacgacccgtc
tcacagcagcaccaccgagtgctgacttctcgtcaggtgtgttcagtgtgtgtgtgtcct
atgggcagaggggctgccatggtcattgagaccctgaacctctgcttccacctggcctgt
tttcagtgtgtggactgcaggtgccgacttggagggtcagaggtcagagcccagatcaga
atccgtaacgggaagccttactgtgacccctgctacatcagactcaagtcacaccttgcc
acctccctgtga
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