Oncorhynchus masou masou (cherry salmon): 135538552
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Entry
135538552 CDS
T10723
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135538552
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135538552
PBAF complex
135538552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Pcf11_helical
RMI1_C
GCN5L1
CENPH
Motif
Other DBs
NCBI-GeneID:
135538552
NCBI-ProteinID:
XP_064820514
LinkDB
All DBs
Position
5:complement(26559237..26569650)
Genome browser
AA seq
429 aa
AA seq
DB search
MSKRERERPYAPPPPPAPTTQLPNTPGFVGYNPYSHLAYNNYRLGGTTSNNSRATNSSGI
NIPKPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLN
DYEAEKIEYNESMKAYHNSPAYLAYVNAKSRAEAALEEESRQRQSRLDKGEPYMSIQPAD
DPDDYDDGFSMKHSAAARFQRNHRLISEILSESVVPDVRSVVTTARMQVLKRQVQSLMVH
QRKLEAELLQIEDRHQDKKRKFIDATESFTSELKRLCCMKVEVDMEKISAEVAAAEDASR
RRMSEREKEASTSSCLEEEEKPVGPSNGSKSQQEPFSDSSNKEREETEPSPMDTGEKSKA
SEESTARPASEVEEGAPSEDKESVPEGVMEEGTSDSNTGSETTSAVTEDAPPSEPAASEG
PSRARPTAH
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagagaaagagaaaggccatatgcccctccccctcccccagcccctacaaca
caattgcccaacacccctgggtttgtggggtacaacccctacagccatctggcttacaac
aactacaggctgggagggacaacaagcaacaacagtcgggcaacgaattcttcaggaata
aacattccaaagccacccaagccaccagacaagccgttgatgccatacatgcgatatagt
cgcaaggtttgggatcaagtaaaagcctccaatcctgatctgaagctatgggaaattggg
aagataatcggtggcatgtggagggacctcactgatgaggagaaacaggattacttgaat
gattacgaagcagagaagattgagtacaatgagagcatgaaggcctaccacaactctcca
gcctacctggcttatgtcaacgctaagagccgcgccgaagccgctctggaggaggaaagc
cggcagcgccagtctcgtctcgacaagggtgaaccgtacatgagtatccagccagcagac
gacccagatgattacgacgatggattctccatgaagcactcggctgccgcccgtttccag
cgcaaccaccgcctgatcagcgagatcctgagcgagagcgtggtccccgacgtgcgctcc
gtcgtcactaccgcccgcatgcaggtcttaaaacggcaggtccagtctcttatggtgcac
cagaggaagctggaggcggagctacttcagattgaagaccgccaccaggacaagaaaagg
aaattcatcgatgccacagagtctttcaccagcgagctgaaaaggctgtgttgtatgaaa
gtggaggtggacatggagaagatatctgcagaggtcgctgcggcagaggatgcatcccgc
aggcgtatgtcggagcgggagaaggaggcgtccacgtcctcttgcctggaggaggaggag
aaaccagttggcccgtcaaacggcagcaagagccagcaggagcctttcagtgacagcagc
aacaaggagagagaggagactgaacccagccccatggatactggtgagaagtcaaaggcc
tcggaggagtcgacggctcgtcctgccagtgaggttgaggagggggcgccgtcagaggac
aaggagagtgttccagaaggggtgatggaggagggcaccagtgacagtaacacagggtcg
gagaccacctctgccgtgacggaggacgccccgcccagcgagccagcagcctcagagggg
ccgagtcgggcacgccctaccgcccactga
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