Oncorhynchus masou masou (cherry salmon): 135538691
Help
Entry
135538691 CDS
T10723
Symbol
rnf180b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135538691 (rnf180b)
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135538691 (rnf180b)
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135538691 (rnf180b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
135538691
NCBI-ProteinID:
XP_064820662
LinkDB
All DBs
Position
Unknown
AA seq
516 aa
AA seq
DB search
MDNPGAVAMLRCRKCRKGFVDTACLHPIVPDDDTTAAGTCSVWHMNVDTLPEWILTSVHQ
AQWTVGKLNCGNCGARLGGFNFLNNTKCPCGQESTVHLSKSRVDQDHKRYLHVVRPQTTR
GRGGPGCLKGEPVGSHSEQYRSEVGEDFLVGSQLCCTSVSRLNAESRPITTHPDAFFQLA
DIRATQSVPLSSPSIVSHTKFGARGRLEPSCSSGSQTGPVEVTEGEVRTGTEQLPYSPVV
SHTPHLFATSIIRSPTCLSRLTRETPGSRLLSLRGPGVSHIPGEQEEERRGTPTELQAQV
VANNASPARQRFSKKEKNWLKSQRRKQRKKERWLHSQEQSVTGLLTDSEEVDREGYTCAV
CLDVYFSPYSCHPCGHIFCEPCLRTLAKNRPANTPCPLCRTLISHTLFQKELNQTAKTFF
PKVYHSRKHNFQKANCAKWPLPNCPKRFRIFWRYQGQVAPGRWWHFAPAGFALDALDLAD
MRGWFFDIDLVIIYIHSVNWILALLVLCFLAYLFLS
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggacaacccaggggcagtggctatgctccgctgcaggaagtgtcgtaaaggttttgta
gacacagcatgcctgcatccgatagtgcctgatgatgacacaacggcagcaggtacatgc
agtgtctggcacatgaacgttgatacactgccagagtggatactgacgtcagttcaccag
gcccagtggacagtggggaagctgaactgtgggaactgtggtgctcgcctgggtggcttc
aactttctcaacaacaccaaatgcccctgtggtcaggagtccaccgtgcaccttagcaag
agtcgggtcgaccaggaccacaaacgctaccttcatgtggtcagaccgcagacgacgaga
ggtaggggaggaccgggctgcctgaagggcgagccggtgggttctcacagtgagcagtac
aggtctgaagtcggggaggactttctggttggctcacagctctgctgtacttctgtgtcc
cgccttaacgctgagagccgaccaatcacaacacacccagatgcctttttccagttggct
gacatcagagccacccaatcagttccattgagctcccccagcattgtttctcatacgaag
tttggtgcgaggggcaggttggaaccctcctgtagctctggctcccagactggccctgtt
gaagtgactgagggagaggtgaggactgggacagagcagctgccctattcacctgttgtg
tcccacacccctcatctatttgcaacgagtattattaggtcgcctacctgcctatcacgt
ctgactagagagacccctggttctcgtcttctctccctgagagggccaggtgtctcccac
atccctggagagcaggaggaggagagaaggggaacccccacagagctccaggcccaggta
gtagccaacaatgcttctccagccagacaaaggttcagcaagaaagagaagaactggctg
aagagccagaggaggaaacagaggaagaaagagcgctggctccactcccaggaacagagt
gtgacagggctgctaacagacagtgaggaggtggacagagagggctacacctgtgctgtg
tgcctggatgtctacttcagtccctatagctgtcacccctgtggccacatcttctgtgag
ccctgcctccgcacgctggccaagaaccggccagccaacaccccctgtcccctctgccgc
accctcatctcacacacactcttccagaaagagctcaaccagacagctaagacttttttc
ccgaaggtctaccactcacggaaacacaactttcaaaaagccaactgtgctaaatggcct
cttcccaattgcccaaaacgtttccgcatcttttggaggtaccaggggcaggtggctcca
gggaggtggtggcactttgccccagcaggctttgccctggatgccctggacctggccgac
atgcgcggctggttcttcgatattgacctggtcatcatctacatccactctgtcaactgg
atactggccctgctggttctttgctttctagcatacctattcttgtcttga
DBGET
integrated database retrieval system
