Oncorhynchus masou masou (cherry salmon): 135538779
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Entry
135538779 CDS
T10723
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135538779 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omm03021
]
135538779 (cpsf4)
03019 Messenger RNA biogenesis [BR:
omm03019
]
135538779 (cpsf4)
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
135538779 (cpsf4)
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
135538779 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
135538779
NCBI-ProteinID:
XP_064820766
LinkDB
All DBs
Position
Unknown
AA seq
277 aa
AA seq
DB search
MQDLIATVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFMRAACLKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICMNYLVGFCPEGRSCKFMHPRFELPMGATEQPP
LPAQILGHQKPLPSLGRSSLSLIQLTNPGGGAGPHQHQHHQRQPYSSGPSMHQHHNNMGG
GNRGPRPLDQVTCYKCGEKGHYANKCTKGHLAFLSGQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacctgatagccaccgtggaccacatcaagtttgatctagagatagctgtggag
cagcagctgggggctcagcctctccctttccccgggatggacaagtccggggctgctgtg
tgtgagttcttcatgagagcagcctgtctcaaaggtggtatgtgtccgttccgtcacatc
agtggggagaagacggtggtgtgtaaacactggctcagaggactctgtaagaagggagac
cagtgtgagttcctccacgagtacgacatgaccaagatgcccgagtgttacttctactcc
aagttcggagagtgcagtaacaaggagtgtccgttcctccacatcgacccagagtctaag
atcaaagactgtccctggtatgacagaggcttctgcaaacatggtccagactgtagacat
cgccacaccagaagagtaatctgtatgaactacttggttggtttctgtccagagggacgg
tcctgtaaattcatgcacccgcggtttgagctgccgatgggagccacagaacagcctcct
ctaccagcacagatactgggtcaccagaagccgttgccttcgcttggccgctcgtccctg
tcactcatccagctgaccaatcctgggggaggtgcaggtcctcaccagcatcaacaccat
caacgccagccatactcctctggtcccagcatgcatcagcaccacaacaacatgggagga
gggaacaggggtccacgcccactagaccaggtcacctgctacaagtgtggtgagaagggc
cactatgccaataaatgcaccaaaggacatctggccttcctcagtggacagtaa
DBGET
integrated database retrieval system
