KEGG   Oncorhynchus masou masou (cherry salmon): 135539273
Entry
135539273         CDS       T10723                                 
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
  KO
K10652  tripartite motif-containing protein 25 [EC:2.3.2.27]
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Pathway
omm04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:omm00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    135539273
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omm04121]
    135539273
Enzymes [BR:omm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     135539273
Ubiquitin system [BR:omm04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    135539273
SSDB
Motif
Pfam: SPRY PRY zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_2 zf-B_box zf-C3HC4 zf-C3HC4_4 zf-RING_5 ANCHR-like_BBOX U-box
Other DBs
NCBI-GeneID: 135539273
NCBI-ProteinID: XP_064821180
LinkDB
Position
5:28428648..28445353
AA seq 673 aa
MADKMFSLMSLEDELSCSICLCAFDCPVTIPCGHNFCQACLLETWKDNYSCPQCRTHFTT
KPVLKKNTVLSTVVETFKMKSNKSDLPNEMGDLIKWDAVKMEPKEVVILCDTCMEAKAFK
TCLTCMASFCLEHVRPHHENPVFGAHQLNEPLGDLCDRICPDHHKLMEFYCVQHGRCICG
VCLQQVHKGCTFSNPDEQRALQESDLRGKLCLLDGKIDKNQTVISQMSDQQSKLKDSAAS
RKRALEDDYRQIRELLDRDEREALNTVDREQESGQTKLQNLIKKFNQNIVKLSAAKDGVN
SLLSRTQTVAFLQASVDMPAVVAFDPYTPKVNLDSKAVAAWHAYSAVLREHLTHVLKQPV
EARLQILKPAERFAPLLPNFYEMGGMPPPGHLRMPRSHSPGAPLRANQKKPPQDSNRERK
SDKKRDHKEWKEHKADKNSQKPPNAPRESATPVPHTPRDHPRGQSAEPRTRNREDPGQAS
VPPSITSAAKRNDLLRYGTVLTLDPKTAHKRISLTENMTMASVSDEPTPYPDGPARFSVC
SQVLTSKGFSRGRHYWEVKMSSNNFTGIGLAYNSIDRKGPASRLGRNAQSWCVEWFNVKL
SAWHASSETVLQNPNPIRVGVLLDCEEGTATFYNVQDRAYPFHTFVFQFAEAVYPAFWLF
SSGSSVSLCKLQS
NT seq 2022 nt   +upstreamnt  +downstreamnt
atggccgacaaaatgttttccctcatgagtctcgaagacgaactgagctgtagcatctgc
ctatgtgctttcgactgtccggtgacaattccatgtggacacaacttttgccaagcgtgt
ctcctagaaacatggaaagacaactacagctgtccacaatgccggacccacttcaccacc
aaaccagtgctgaagaagaacaccgtcctcagcactgttgtggaaacgttcaaaatgaag
tcgaataaaagcgacctccccaatgagatgggcgacttaatcaagtgggatgcggtcaag
atggagcccaaagaggtggttatcttgtgcgacacctgtatggaagccaaagcattcaag
acctgcctcacgtgtatggcgtcgttctgccttgagcacgtgaggcctcatcatgagaac
ccagtgtttggcgcgcatcagctgaacgagcctctgggcgacctgtgcgaccgtatctgc
cccgaccaccacaagctgatggagttctactgtgtccaacatggccgctgtatctgtggt
gtctgtctgcagcaggtgcataaaggctgtaccttctccaaccccgatgaacaacgggca
ctgcaagagtctgatttgaggggcaagttgtgtctgctggatggaaagattgacaagaac
cagacagtcatctctcagatgagtgaccagcagagcaagttgaaggactctgcagccagc
aggaagagagcgctagaggatgactaccgccaaatccgggagctgctggaccgtgacgag
cgtgaggctctgaacactgtggaccgtgagcaggagagcggtcagaccaaactccagaac
ctcataaagaagttcaaccagaacattgtgaagcttagcgcagcaaaagatggcgtcaac
agcctgctcagtcggactcagaccgtggctttcctacaggcctcagttgacatgccggca
gtggtggcctttgacccctataccccgaaggtgaacctggactctaaggccgtggcagcc
tggcatgcctactctgcagtcctgagggagcatctcacacatgtactgaaacagcctgta
gaggccagactgcagatactcaaaccagctgagagatttgctcctctgctgccaaacttc
tatgaaatgggaggtatgccaccaccaggtcacctgagaatgcctcgatcccacagccca
ggagctcccctcagggcaaaccagaagaagcctccacaagattcaaaccgagagagaaag
tcggacaagaaacgagatcacaaggaatggaaagaacataaggctgacaaaaattcccaa
aagccacctaatgctcccagagagtccgccactcctgttccacacacaccaagggaccac
cccagaggacaatccgcagaacccagaaccaggaacagggaggacccaggacaagcaagt
gttcccccaagtatcacgtctgcagcaaaacgaaatgaccttctacgatatggcaccgtt
ctcacccttgaccccaaaacggcccacaagcgcatctccctgacagagaacatgaccatg
gcctctgtgtcagacgagcccaccccttaccccgatggccccgcccgcttctccgtctgc
agccaggtgctcacttccaagggcttctcccgcggccgccactactgggaggtcaagatg
agcagcaacaacttcaccggcatcggcctggcctacaacagcatcgaccggaagggtccg
gctagccggctggggcgtaacgcccagtcctggtgcgtggagtggttcaacgtcaagctg
tcggcctggcacgccagcagtgagactgtactgcagaacccgaatccgatccgcgtcggc
gtgcttttggattgtgaggagggaacggccactttctataacgttcaggaccgggcatac
cctttccatacgtttgtgttccagttcgcggaggcagtgtacccggcattctggctcttc
tccagcggctcgtctgttagcctgtgcaagctgcagtcttaa

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