Oncorhynchus masou masou (cherry salmon): 135539611
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Entry
135539611 CDS
T10723
Name
(RefSeq) eukaryotic translation initiation factor 4B-like isoform X1
KO
K03258
translation initiation factor 4B
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
135539611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135539611
03012 Translation factors [BR:
omm03012
]
135539611
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
135539611
mRNA cycle factors
Stress granule specific factors
135539611
Translation factors [BR:
omm03012
]
Eukaryotic type
Initiation factors
eIF-4
135539611
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
135539611
NCBI-ProteinID:
XP_064821663
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All DBs
Position
5:complement(42417282..42473392)
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AA seq
604 aa
AA seq
DB search
MAAAAKKKGNKKGKTLTLTDFLAEDSRSGGNAPPPQPSYAKSTSWADETDDLEGDVSTSW
HTGEDSYRAPAIDRNILPTAPRSAREPNVDRSRLPRSPPYTAFLGNLPYDVSEESIKDFF
RGLAISAVRLPREPSNPERLKGFGYAEFDDVDSLLRALTLNEENLGNRRIRVDIADQSND
KEGRDNGQMGGRDRMGRMGDMAGPDKTDSDDWRARPTADADDGPPKREESAFGSRDRYGD
RDGLRRDDRGFGDRGGDRDRGFGGRDRYDDRGGENGGETIAQNLTDRHQSRPAFGSRRDR
DDGGRRAFGSGYRRDDDDQSGGGGGSRYGARDRYGGDREGRYERQDEGREERGEGGPTER
PKLVLKPRSMAKEEQPAGSGGAPPAAPAAARSSSRASIFGAAKPVDTAAKEREVEEKLQR
QLEEDQSKGFDRKPRNRDRDPSWRNEEPPSERSRTGSESSHPGSTSGGRASRRRESERSV
ENEVFSGKEDDPPSPVARPSSANSSTFSSKEPLKVMPTLPPKENAWAKRPALSTGSSEGC
APISTSDTAPPKLRKSKRRGRDSRPAPEPKKYEESPTLKFCSASKYAVLLMDREQGDDAE
NGVE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcagctaagaaaaaggggaataagaaggggaagactctgaccctcactgac
ttcctcgcagaggacagtaggagtgggggcaacgctccaccaccgcaacccagctacgcc
aagtccaccagctgggctgatgagaccgatgacctggaaggagatgtgtccacctcctgg
cacacaggggaggacagttaccgggcccccgcaatagaccgtaacatcctgcccacagcg
ccacggtcggcccgtgagcccaatgtggaccgttcacgcctcccccgcagccccccctac
acagccttcctgggcaacctgccctacgatgtctcagaggaatctatcaaggacttcttc
cggggcctagcgatcagtgcggtgcgcttgccacgggagcccagtaacccagagaggctg
aagggctttggctacgcagagtttgacgacgttgactccctcttgagggcgctgactctc
aacgaggagaacctgggaaaccgcaggatccgggtggatattgcagatcagtccaatgac
aaggaggggagagacaatggtcagatgggtggacgagaccggatgggccgcatgggagac
atggcaggccccgacaagacagacagtgatgactggagggcccggcccactgcagacgcc
gacgatggacccccaaagagagaggaatccgcctttgggtcacgcgaccgctacggagac
cgtgacgggctgcgaagggacgaccgcggcttcggcgaccgtggcggcgaccgggaccgc
ggctttggcggcagagaccgctatgacgaccggggaggtgagaacggaggtgaaaccatt
gctcaaaacttaacggatcgtcatcaatctagaccagcctttggctcccgcagggatagg
gatgacggagggcgacgtgccttcggcagtgggtaccgccgtgacgatgacgatcagagt
ggcggaggtggtggtagccgctatggggcccgggatcgctacggcggagaccgggagggc
cggtacgagaggcaggacgaagggcgcgaggagagaggtgagggtggtcccaccgagagg
cccaagctggtcctgaagccgcgcagcatggccaaggaggagcagccggccggcagcggt
ggggctcccccagctgctccggcagccgcccgcagctctagtcgagcctccatctttgga
gcggccaagcccgtggacacagcggctaaggagcgggaggtggaggagaagctccagagg
cagctagaagaggaccagtccaagggcttcgataggaaacctcgcaacagagacagggac
ccaagctggaggaatgaggagccaccttctgagcggtcccgcacaggaagtgagtcatca
catcccggaagtacctctggtgggagagcctcacggcgcagagagagcgagcgctcagtg
gagaacgaagtattcagcggtaaggaggacgaccctccctctcctgtggctcgcccctct
tctgccaactcttccaccttctcctccaaggagcccctcaaggtgatgcctacactgcca
cctaaggagaatgcctgggccaagcggcctgcattgagtaccgggtccagcgagggatgc
gcccctatctctaccagtgacacggcacctcccaaactgagaaagtctaaaagaagaggc
cgagactcaagacctgcaccagagccaaagaaatacgaagagtcccccacccttaaattc
tgctcagccagtaaatacgctgttctgctaatggacagagagcaaggagatgacgcagag
aatggtgtggaataa
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