Oncorhynchus masou masou (cherry salmon): 135539631
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Entry
135539631 CDS
T10723
Name
(RefSeq) syntaxin-18-like
KO
K08492
syntaxin 18
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04130
SNARE interactions in vesicular transport
omm04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
135539631
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
135539631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135539631
Membrane trafficking [BR:
omm04131
]
SNARE
Syntaxin (Qa)
Stx-rER
135539631
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
DUF4378
DUF7165
Motif
Other DBs
NCBI-GeneID:
135539631
NCBI-ProteinID:
XP_064821700
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All DBs
Position
5:44155589..44175529
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AA seq
332 aa
AA seq
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MAVDITVLFKASVKTVKTRNKAIGVGFDLPKDEIFKKSRPKHGFSLKAKEVISNITKLKD
FLLQHRKDYVNAGSLISSDLTRMTDNERDQIDQDAQIFMRTCSEAIKQLRSEAEKQVLPT
QIREHRGAVLDLIEIYLRGVCKLYSEQRAIRVKRVVDKKRLSRLEPEHHHSRVAVERSSP
AEQHSEEKTAKEESSSGGERSVTEVPENIVSLWEEGQGRVEDELSPEEMQMFEQENQRLV
SEMSNLVDEVRQIEGKVVEISRLQEIFAEKVLMQETEIDSIHQLVVGATENVKEGNEDIR
EAIKNNAGFRVWILFFLVMCSFSLLFLDWYDS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgatataactgtactgttcaaagccagtgtcaaaacggtaaaaacacgaaat
aaagctatcggagtagggtttgatttgcctaaagatgaaatcttcaagaagagcagaccc
aaacatggattttctctcaaggcgaaggaagtgatctccaacatcaccaagctgaaagac
tttctgctgcagcacaggaaggactatgtgaatgctggaagtctcatctcgtcagaccta
acccggatgacagacaatgagcgagaccagatcgaccaggacgcccagatcttcatgaga
acctgctctgaggccatcaagcagctccgctctgaagccgagaagcaggtgttaccgaca
cagatcagagagcacaggggggcggtcctcgacctcatcgagatatatttgagaggagta
tgcaagctttactccgagcagagggctataagagtgaagagagtggtggacaagaagaga
ctgtccagactagagccagagcaccaccacagtagggtggcggtagagagaagctcaccg
gcggagcagcacagcgaggagaaaacagctaaggaggagagcagcagcggtggtgagcgg
agcgtgacggaggtaccggagaacattgtgagcctgtgggaggagggccagggccgtgtg
gaggacgagctctcgcctgaggagatgcagatgtttgaacaagagaaccagaggctggtg
agtgagatgagcaacctagtagatgaagtcaggcaaatcgagggcaaggtcgtcgagatc
tcgcgactccaggagatctttgcggagaaggtgctaatgcaagaaactgagatcgacagt
atccatcagctagttgtgggagccactgaaaacgttaaagagggaaacgaggacatacga
gaggccatcaaaaacaatgctggattccgtgtctggatcctcttcttccttgtcatgtgc
tccttctctctgctcttcctggattggtacgacagctaa
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