Oncorhynchus masou masou (cherry salmon): 135539711
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Entry
135539711 CDS
T10723
Name
(RefSeq) dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1-like
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04010
MAPK signaling pathway
omm04020
Calcium signaling pathway
omm04260
Cardiac muscle contraction
omm04261
Adrenergic signaling in cardiomyocytes
omm04270
Vascular smooth muscle contraction
omm04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135539711
04020 Calcium signaling pathway
135539711
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
135539711
09153 Circulatory system
04260 Cardiac muscle contraction
135539711
04261 Adrenergic signaling in cardiomyocytes
135539711
04270 Vascular smooth muscle contraction
135539711
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135539711
Ion channels [BR:
omm04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
135539711
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
135539711
NCBI-ProteinID:
XP_064821845
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All DBs
Position
5:47139784..47171116
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AA seq
1832 aa
AA seq
DB search
MAESGGEPNLQSYIMDEETLKRKQKEKLKKLLATGGNPRPARSLFFLTLKNPFRKAAINI
VEWKPFEIIILLTIFANCVALAVFLPMPEEDSNNTNSNLESLEYIFLIVFSIECFLKIIA
YGFLFHENAYLRNCWNILDFVCVSVGLFAVIGDFITYISGVEAQPGDKGGGFDMKALRAF
RVLRPLRLVSGVPSLQVVMNSILKSMLPLFHISLLVFFMVTIYAIVGLELFKCKMHKTCY
YTGTNIIATVENEKASPCAQAGNGRRCTINGTECRTGWAGPNNGITHFDNLGFAMLTVYQ
CITTQGWTDVLYWVNDAIGMEWPWMYFLTLILVGSFFVLNLVLGVLSGEFTKEREKGKAR
GEYTEMRETQQLDEDLKGYMEWITQAEVMDADGEGQGLLTLEDGESEAGSLKDMDTMQKI
MYYYKLARKWNIFFRRKCLVYVKSRMFYWWVILLVFLNTLAIATEHHKQSQQLTEWQDTA
NKVLLSLFAIEMFMKMYALGLQQYFMSLFNRFDCFVVSTGILELVLVGMDVMTVMGISVL
RCIRLLRLLKVTKYWTSLSNLVVSLLNSTPSIACLLLLLFLFIVIFSLLGMQVFGGKFNF
PNAPKPRSTFDSFPQALISVFQILTGEDWNSVMYDGIMAHGGPTMPGILVSIYFIILFVC
GNYILLNVFLAIAVDNLAEAESLTMAQKEKSEEKKRKKLLRANMPDKATEEKALLAKKLA
AERAKIEGIPTTAKLRVDEFESNVNEIKDPFPPADFPGDDEEEEPDIPDTPRPRPMADLQ
LKEEVVPIPEASSFYIFSSDNKIRKLCHRIINATAFTNIILLFILLSSISLAAEDPIDPM
SFRNQVLASADVVFTSVFTVEVVLKMTVYGAIMHPGSFCRNSFNILDLIVVSVSLLSMLM
ESSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTMLLDFMFACI
GVQLFKGKFYACTDPDKMTEEECKGNYIRYQEGAIHPMTIHKREWINAELNFDNILEGML
ALFTVSTFEGWPKLLYKAIDSNMEDVGPVYNNRIAISIFFIVYLILIAFFMMNIFVGFVI
VTFQEQGEQEYKNCELDKNQRACVEYALKARPLRCYIPKNPYQYNVWYIVTSCYFEYLMF
LLIMLNTMCLGMQHCNQSTHVTDLSDMLNVIFTVLFTVEMVLKLMAFKAKGYFGDPWNVF
DFVIVIGSVVDVILSEVDAALASSGGLYCLHGCAEVNPMQAIADSENARVSITFFRLFRV
MRLVKLLNRSEGIRNLLWTFIKSLQALPYVALLILMLFFIYAVVGMQIFGKIALIDGTYI
NRNNNFQTFPHAVLLLFRCATGEAWQEVMLACLYGKRCDPKSDYLPGEEMTCGASFAIIY
FMSFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFRKIWAEYDPEATGRIKHL
DVVTLLRRIQPPLGFGKFCPHRVACKRLVSMNMPLNSDGTVTFNATLFALVRTALKIKTE
GNFEKANEELRAIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLIQDYFRKLKKRQ
EEYYGFRPTKKNAKNEIQAGLRSIEEEEAPELQRAISGDLMNEEEMDRAMEDAAEEGIFR
RAGGLFGNHVDSFTMEEGTRDPNATQVTSQRPLQMSRSDDGEATSSPAYHANEDFFPSTP
NKTNNNNVNNNAGESFSCGTYDRVQVYTISTSRSPPDRDWQLQIVAGPRQDAEPHREPLS
LQQVQGPESAFDTLIQEVLINGGFESLARDPRFVSVTKREMAEALNFDPVDMESSATELM
NGRRGSVVTRPIRPPRRSQRKANQSTTPRDVV
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagtggcggtgagcctaacctgcagtcctacattatggacgaggaaactctg
aagaggaagcagaaggagaagctgaagaagctcctggccacggggggaaaccctcggccc
gcacgctccctcttcttcctcacattgaagaaccccttccgcaaggctgccatcaacatt
gtggaatggaaaccgtttgagatcatcatcctgctgaccatctttgccaactgtgtggcc
ctggctgtgttcctgcccatgcctgaggaggacagcaataacaccaacagcaacctggaa
agtctggagtacatcttcctcatcgtcttctccatagagtgctttctaaaaataatagcc
tatggatttctatttcacgagaatgcgtatctgcggaactgttggaacatactggatttt
gtctgtgtatctgtggggctgtttgcagtcatcggggacttcatcacctatatcagtggt
gtggaggctcaaccaggggacaagggaggaggcttcgacatgaaggccctcagggcattc
agggtgctccggcccctcaggctggtctctggagtccccagcctgcaggtggtgatgaac
tccatcctgaaatccatgctacctctgttccacatctccctgctggtcttcttcatggtc
accatctacgccatcgtgggactggagctgttcaagtgcaagatgcataaaacctgctac
tacacaggcacaaatatcatagccacagtggagaatgagaaggcatctccatgtgcccag
gccggtaatggtcggcgctgcaccatcaatgggacagagtgtaggacgggatgggccgga
cccaacaacggcatcacacactttgacaacctgggcttcgctatgctcactgtctaccag
tgcatcactacccagggctggaccgacgtgctctactgggtgaatgatgccatcggtatg
gagtggccgtggatgtactttctgacactcatcttggttggctccttctttgtactcaac
ctggttctgggcgtgctcagtggtgaattcactaaggagcgagagaagggtaaggcgcgt
ggagagtacacagagatgagggagacccagcagctggatgaggatctgaagggttacatg
gagtggatcacacaggccgaagtcatggacgccgacggggaaggacagggcctgctaacg
ctggaggatggagaatccgaggcagggagcctaaaggacatggacaccatgcaaaaaatc
atgtactactacaagctggctcgtaaatggaacattttcttccggcgtaagtgtcttgtg
tatgtgaagtcccgtatgttctactggtgggtgatccttctggtgttcctgaacacgctg
gccatcgctactgaacaccacaagcagtcccagcaactcaccgagtggcaagacactgcc
aacaaggtgctgctgtctctgtttgccattgagatgtttatgaagatgtacgccctgggt
ctccagcaatacttcatgtctctgttcaaccgctttgactgcttcgtggtctccaccggc
attctggaactcgtcctggtcggcatggacgtcatgaccgtcatggggatctctgtgctg
cgctgcattcgactacttaggctgctcaaagtaaccaagtactggacgtctctcagtaat
ctggtggtgtccctgctgaactcaaccccctccatcgcctgcctgctcctcctcctcttc
ctcttcatcgtcatcttctctctgctgggcatgcaggtttttggggggaagttcaacttc
cccaatgcgcccaaaccccgcagcacctttgacagcttcccccaagctctcatcagtgtc
ttccagatcctgacgggggaggattggaactctgtgatgtatgatggcatcatggcgcat
ggcggtcccaccatgcccgggatcctcgtcagcatctacttcatcatcctcttcgtctgc
ggaaactacatcttgctgaatgtgttcctggccatcgctgtggacaacctggcggaggct
gagagtctgaccatggcccagaaggagaagtctgaggagaagaaacgcaagaagctgctc
agggctaacatgcctgacaaggccacagaggagaaagccctcctggccaagaagcttgca
gcggagagagccaaaatagagggcatccctaccacagccaagctgagagtggacgagttt
gagtccaacgtgaacgagatcaaggaccccttcccgcctgctgacttccctggtgatgat
gaggaggaggagcctgatatccctgacaccccgaggccacggccaatggcagacctgcag
ctgaaggaggaggtggtgcctattccagaggccagctccttctatatctttagctctgat
aacaagatccgtaagctgtgccaccgcatcatcaacgccaccgccttcaccaatatcatc
ctcctcttcatcctcctcagcagcatctccctggctgccgaggaccctatcgaccccatg
tccttcaggaaccaggtgctggcctccgctgatgtggtcttcacctcagtgttcactgtg
gaagttgtcctcaagatgaccgtatatggcgccatcatgcaccctggctccttctgtcgg
aactcctttaatatcctggatctgattgtggtcagcgtatccctcctctccatgctcatg
gagtccagtgctatctctgtggtgaagatcctcagggtgttgagggtgctgaggccccta
agggccatcaacagggccaagggcctcaagcatgtggtccagtgtgtttttgtggccatc
aaaaccattggcaacatcgtgctggtcaccatgctgctagacttcatgttcgcctgcatt
ggagtccagctcttcaagggcaaattctatgcctgcacagatcctgacaaaatgacagag
gaggagtgcaagggcaactacattaggtaccaggaaggtgccatccatccgatgaccatc
cataagagagaatggatcaatgcagagctcaactttgacaacatcctcgaaggcatgctg
gctctcttcactgtctccaccttcgagggctggccaaagttgctctacaaggccatagac
tctaacatggaagatgtgggtccggtgtacaacaaccgcatcgccatctccatcttcttc
atcgtctacctcatcctcatcgctttcttcatgatgaacattttcgtgggtttcgtcatc
gttacatttcaggagcagggagagcaggagtacaagaactgcgagctggataagaaccag
cgtgcgtgtgtcgagtacgccctgaaagcccggccgctgcgctgctacattcctaagaac
ccgtaccagtacaacgtgtggtacatcgtcacctcctgctactttgagtacctgatgttc
ctgctcatcatgctgaacaccatgtgtctggggatgcagcactgtaaccagtcgacccat
gtgaccgacctgtcagacatgctgaatgtgatcttcactgtgctcttcactgtggagatg
gtcctcaaactcatggccttcaaagctaagggttactttggagacccttggaacgtcttt
gactttgtcatcgtcatcggcagcgtcgttgacgtcatcctgagtgaagtcgatgcagcc
ctggcctcctctggaggactgtactgtctccacggctgcgctgaggtgaacccaatgcaa
gcgatagcagattctgaaaatgcccgtgtgtcaatcactttcttccgactgttccgtgtg
atgcgtctggtgaaactgctaaaccgttctgaagggatccggaaccttctgtggaccttc
atcaagtccttacaggccctgccctacgtcgccctgctcatcctcatgctgttcttcatc
tatgctgtggttgggatgcagatatttggtaagatagcgctaatagacgggacgtacatc
aacaggaacaataacttccagacgttcccccatgctgtgctgctgctctttaggtgtgcg
acaggtgaggcgtggcaggaagtaatgttggcgtgtctgtatgggaagaggtgtgaccct
aagtcagactacctgcctggggaggagatgacctgtggagccagcttcgccatcatctac
ttcatgagcttctacatgctctgtgccttcctgatcatcaacctgtttgtggcggtcatc
atggacaactttgactaccttacacgtgattggtccatcctgggtcctcatcacctggac
gagttcaggaagatctgggcagagtacgacccagaggccacggggcgtattaagcacctg
gacgtggtgactctgctccgtaggatccagcctcctctgggttttggaaagttctgcccc
catagagtagcctgcaagagactggtgtccatgaacatgccactcaacagtgacggaacg
gtcacctttaacgctacgctgttcgcactggtcaggaccgcactgaagatcaagactgaa
ggcaactttgagaaggccaatgaggagctgagggccatcatcaagaagatctggaaacgc
accagtatgaagctgctggaccaggtcatcccaccaatcggagatgatgaggtgaccgtg
gggaagttctacgccaccttcctgatccaggactacttcaggaagttgaagaagagacag
gaggagtactatggcttccgccccaccaagaagaacgccaagaatgagatacaggcaggt
ctgaggagcattgaggaggaggaggctccagagctgcagagagccatctccggagacctg
atgaacgaggaggagatggacagagccatggaggacgcagcggaggagggtatcttcagg
cgggcgggcggtctgtttgggaaccacgttgattccttcaccatggaggaaggaacccgt
gaccctaacgctacacaggtgaccagccagcggcccctgcagatgagcagatcagacgac
ggggaggctaccagttcacctgcctaccatgcaaacgaggacttcttcccctcaacgcct
aacaaaaccaataacaacaatgtcaacaacaatgccggggagagcttttcttgtgggaca
tatgaccgagttcaggtctataccatctcaaccagcagaagtcccccagacagagactgg
cagctgcagatagtagctggacccaggcaggacgctgagccccacagagagccgctcagc
ctccagcaggtccagggcccagaaagcgccttcgatacacttatacaggaggtcttgata
aacggtgggtttgagagcttggccagggaccctcgttttgtgtcggtgacgaaacgggaa
atggctgaagcgttgaactttgaccctgtggacatggaaagttccgccactgagcttatg
aatggtcgcagagggagcgttgtcacacgtccaatcaggccccctcgcagatcacagaga
aaggccaaccaatcaacaacacccagggatgttgtgtag
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