Oncorhynchus masou masou (cherry salmon): 135539740
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Entry
135539740 CDS
T10723
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
135539740 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135539740 (nfasca)
Cell adhesion molecules [BR:
omm04515
]
Immunoglobulin superfamily
L1 family
135539740 (nfasca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Ig_5
C2-set_2
Ig_4
Ig_VEGFR-1-like_5th
Ig_6
BiPBP_C
DUF3792
Mucin
Motif
Other DBs
NCBI-GeneID:
135539740
NCBI-ProteinID:
XP_064821885
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All DBs
Position
5:48401982..48555265
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AA seq
1362 aa
AA seq
DB search
MLAQGGPWALSVMSLVLLLWQEVSAIDVPLDSKIQQDLKQPPTIMKQSLKDYIVDPRDNI
IIECEAKGNPVPTFSWRRNGKFFNVGKDPRVTMRKRSGTLEISFRSGGRPEDYEGEYQCF
ASNDFGTALTNKILLRVSKSPLWPKEVLEPVVVGEGSPLVLACNPPPGLPPPLTFWMDSA
MMPITQDKRVSMGLNGDLYFSNVLAKDSHTDYSCNARFLFTHTIQQKNPFTLKVQTKEPY
NDTSSVNSTDPYGGRKVAETTPSFLSPTGTDSSRMVMRGEKLKLECIASGVPTPSIKWFK
KGGDLNQKVKLDNFNKTLRIDSVSEEDAGEYMCMANNQIGSIRHSIYVQVKAAPYWLDQP
SNLVLAPDENGRLVCRANGNPKPHIQWLVNGGPIESNSSLPNPSRTVAGDTIMFRSVQIG
SSAVYQCNASNDHGYLLANAFISILDMAPRMLGPKNQLIKVIENNRTFLDCPYFGSPLPE
LRWFKNGQGSGLDGGHYRVYINGTLEIKRARAEDEGTYTCVASNILGKEENQVLLEVKEP
TRIVRAPEHQLAIRGTMARFDCRVKSDLTLPITVTWLKDDKPLSLGSRLKKDEDSLSIPN
VHEGDEGTYTCTVKTEIDQDTASARLTVSEDASLSPSQSSVLPTGRPDSPMDLELSDAKE
RTIRLTWIHGDDHNSPVTLFVVQFEEDRWESGKWQNLSSYPGDFNSVILELSPFVNYQFR
VIAVNSVGQSLPSLPSQRYQTSGAPPDAIPRGLKGWGTKKNNMEISWEPLLDTERNGPNL
HYSVWWRRKDTGEEWSNVTTVGAKHIVHDTETYVPYEIKLQAVNDFGPGGESNIIIGYSG
EDKPTAPPTDLRVSKIDSTKVNVHWTPVDPSTVLGEFKEYRVYYWREGSMLKNLRVNKEK
KTKGFYSTVAQPTGILTDLQPYSHYRIYMVVANNRYEGPPSNHVEFRTKEGVPEAPKFFK
IIQRSTDVIHLEWDKPLEPNGILIGYKLNYQTVNGSRVGLMQMQSFLPNVTTYTLRLPER
AIRYKFYLAALTQVGAGEVYAEESPHFTNEEDFFSSVEPTDVSVSTTFPPPPPTTTAATT
TISTSTTTPPTTTTTTTTTTTTTTTAATTATTPVLVTSTKQAHTNVLVGMAPGSVIWNLT
VEPNSNYANVSWNHNFPAGSSEFQLEFTLDSNGSMSSVPVNQPPIKLAGLIEGAKYHLRV
YSNEYHSISSNVVTFETSAAYSKDQVDIATQGWFIGLMCAIALIILILLIVCFIKRSRGG
KYPVREKKDLPLDAVDQKGEDGSFDYHSDEDNKPLQGSQNSLDGGVKESDDSLVDYGEGG
DGQFNEDGSFIGQYTVKKDKDETEGNESSEATSPVNAIYSLA
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgttggcgcagggcgggccttgggccctgtctgtcatgtcactggtcctgctgctgtgg
caagaagtgtctgctatcgatgttcctctcgattcaaagatccagcaggacctgaagcag
cctcccaccattatgaaacagtcgttgaaggactacattgttgatcccagagataacatc
atcattgagtgtgaggccaaggggaaccccgtgccaacgttctcatggcgacggaacggg
aagttcttcaacgtggggaaggatccgcgggtgacgatgcggaagcgctcaggaacgctg
gaaatcagcttccggagcggagggaggccagaggactacgagggtgaataccagtgtttt
gcctccaacgactttggaacggcgctgaccaacaagatcctactacgagtgtccaagtct
cctctgtggcctaaggaggtgttggagccagtggtagtgggtgagggatctcccctggtc
ctggcctgtaaccctcctcctggtctgccccctccgctcaccttctggatggacagcgcc
atgatgcctataacccaggacaagcgtgtgtccatgggtctgaatggagacctgtatttc
tctaatgtgctggctaaagactcccacacagactacagctgcaacgcccgattcctcttc
acacacactatccagcagaagaaccccttcacactcaaagtgcagaccaaggagccgtat
aatgacacttcctctgtcaactccactgacccgtacggtggtcgtaaggtagcagagacc
acccctagcttcctctcccccacggggactgacagctcgaggatggtgatgagaggagaa
aagctaaagctggagtgtattgcttccggagttccaactcccagtataaagtggtttaag
aaggggggagacctgaaccagaaggtgaaactagacaacttcaataagactctgcgtatc
gacagtgtgtcagaggaggacgcaggggagtacatgtgtatggccaacaatcagatagga
agcatccgacactccatctacgtccaggttaaagcggctccctattggctggaccagccg
tccaatctggtgctagcgccggatgagaacggtcgtctggtgtgtcgggccaatggaaac
cccaaacctcacatccagtggctggtcaacggagggccgatcgagagcaatagctccttg
cccaaccctagcagaacggtggcaggtgacaccatcatgttccgctccgttcagatcggc
agcagcgctgtgtaccagtgtaatgcatcaaatgaccatggttacttgctggccaacgca
ttcattagcatactggacatggcccccagaatgctgggtcctaagaaccagctgataaag
gtgatagagaacaacagaaccttcctggactgtccctattttggctcgccacttcctgag
ctacgctggtttaagaatggtcaaggaagtggtctggatggtggtcactatcgggtctac
atcaacgggaccctagagatcaagcgtgcacgggctgaggacgaggggacctacacctgc
gtggccagcaacatcctgggcaaggaggagaaccaggtcctcctggaggtcaaagagccg
acacgtattgtcagggctccagagcaccagttagccatcagaggtaccatggctcgtttc
gactgccgggtcaaatcagacctcaccttgcccatcactgttacctggctgaaggatgac
aagcctctctccctgggatcgaggttgaagaaggatgaggattctctgtccatccccaat
gtccatgagggagatgagggaacatacacctgcactgttaaaacagagattgaccaagac
actgcctcggcacgccttactgtgtcagaggacgcctccctgtctccctcacagtctagt
gtcttgcctacaggccgtcctgactctcccatggacctggagctgtctgacgctaaagaa
cgcaccatacgactcacctggatacatggagatgatcacaacagccccgtcacattgttc
gtggttcagtttgaggaggaccgttgggagtcaggcaagtggcagaacctgtctagttat
cccggagacttcaactctgtcatcctggagctctctcctttcgtcaactaccagttcaga
gtcatcgctgtcaattctgtgggccagagcctccccagcctcccctcgcaacgataccag
accagcggagcccctccagatgctatccctagaggcctgaaaggctggggcaccaagaag
aacaacatggagatcagctgggagcccttgttggacacagagcgaaacggccctaacctg
cactactcggtgtggtggcgacggaaggatacgggggaggaatggagtaatgtgacgaca
gtgggtgcaaagcacattgtccacgacacagagacctacgtaccctatgagatcaaactg
caggctgtgaatgactttggaccgggaggcgagtccaacatcatcatcggatactctggg
gaggacaagcccacagcccctcccactgacctgcgagtgtctaagattgacagcaccaag
gtcaatgtccactggaccccagtagatcccagcactgtattgggagagttcaaggagtac
agggtgtactactggcgtgagggcagcatgttgaagaatctgcgtgtgaataaagagaag
aagactaaagggttctacagtaccgtggcccagcctactggcatactgacagacctacag
ccatacagccactaccgcatatacatggtggttgccaacaatcgctacgagggaccgcct
agcaaccatgtggagttccgtaccaaggaaggagtgccagaagctcctaagttctttaag
atcatccagcggagtacagatgttatccacctggagtgggataaacccctggaacctaac
ggcattctgattggatataaactcaactaccagacagtgaacgggtcgcgtgtaggcctt
atgcagatgcagagtttcctacctaacgtgacaacgtacacactccgcctgcccgaacga
gccatccgctacaagttctacctggcggccctcacacaggtgggagcaggggaggtctat
gctgaggagtctccacacttcaccaatgaggaagactttttcagctcagtcgagcctaca
gatgtgtccgtgtctacaactttccctccacctcctcccactactaccgctgctactaca
accattagtacctcaactactactccccctaccactactaccactactaccactactact
actactaccactactgctgcgactactgctaccactcctgtgctggttaccagcaccaag
caagcacatacgaatgtgttggtaggcatggctcctgggagtgtgatctggaacctgacg
gtggagcctaacagtaactacgctaacgtcagctggaaccacaacttcccggccggcagc
agcgagttccagctagagttcacactggacagcaacggcagtatgtcaagcgtacctgtg
aaccagccgcccattaagctggcgggactgatcgaaggggccaagtaccacctgagggtg
tactccaacgaataccacagcatctccagcaatgttgtcacctttgagaccagtgcagcc
tacagtaaagaccaggtggacattgctacccagggctggttcatcgggctgatgtgtgca
attgctctcatcatcctcatcctcctcatcgtctgcttcatcaagaggagtcgcggaggc
aaatacccagtgcgagagaaaaaagatctccctctggatgcagtggatcagaaaggagag
gacggatcatttgactaccacagcgacgaggacaacaagcctctgcagggcagccagaac
tctctggacggcggggtgaaggagagtgacgacagcctggtagactacggcgagggaggg
gatggccagttcaacgaggacggctccttcattggccagtacacagtcaagaaggacaag
gatgaaacagagggcaatgaaagctcagaggccacctcacccgttaacgccatctactcg
ctggcataa
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