Oncorhynchus masou masou (cherry salmon): 135539761
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Entry
135539761 CDS
T10723
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1-like isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
Protein phosphatases and associated proteins [BR:
omm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135539761
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
135539761
mRNA cycle factors
Stress granule specific factors
135539761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135539761
NCBI-ProteinID:
XP_064821932
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Position
5:50118591..50126330
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AA seq
707 aa
AA seq
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MSQFQCPGNLMSSPAASPMQQLSQPQPGYSIPCASGPLPSESASHPLLSSALPSGSATPF
SPTSTVSNMANPKEKTPMCLVNELARFNKIQPEYKLLCEQGPAHSKIFSVRLSLGDQHWE
AEGTSIKKAQHSAAATALAQTTLPKPSMRNNPRNNTVDCMTHTVELNAFCMKLGVKPMYK
PIDPYPGMRPSNFNYNIRAPGPYQRSMQQYYYPFPPVGPVLYHMELNIGGQQFHGKGRTR
QLAKHDAAAKALKTLQKEPILLQQLPETNGEDTENFNKSEISQVFEIALKRNMPVNFEVL
KEAGPPHMKSFMVCVAVGEFCGEGEGKSKKIAKKLAATAVLEELRRLPQLSPSVEKIQPA
RIKKKTKSIIKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYSMMTERGLPRRREFVMQV
TVCGHCAEGLGPSKKVAKRNAAEKMLELLGFKVPPPQPHKPALKTDEKVLQKKNGDGRKV
TFFEPGSVEESQSLGSKAENYRQPYLSHQQLPAGILPMVAEVAQAIGASPSLGHQNKGYG
PRTNPAKATLTAMIANELLYGGTSLTADTILKSQNSMAHLVPHGPLTRPSEQLSYLANVQ
GLQVDYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALSILKLLSELDQQQ
HQQQTNDRTGSGPTSGCGKQDMDGCDSLIIKQANSSNLGQQTLDGTV
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagttccagtgtccgggtaaccttatgtcgagccctgctgccagccccatgcag
cagctgtctcagccccagccagggtacagtatcccctgtgcctcgggccccctgccctcc
gagagcgccagtcacccgctcctgagctcagccctgccctcgggctcagccacgccattc
agccccacctccacagtatctaacatggcaaaccctaaagagaagacccccatgtgtctg
gtgaatgagttagcccgtttcaataagatccagcctgagtataagctgctctgtgagcaa
ggaccagctcattccaagatcttctcagtgcggttatcactgggggatcagcactgggag
gcagaggggaccagtataaagaaggcccagcactctgcagctgccacagccttggcccag
acaacactgcccaaacctagcatgaggaacaacccccgcaacaacacagtagattgcatg
acacacacggtggagctgaatgccttctgtatgaagctaggtgtgaagcctatgtacaag
cccatagacccctaccctgggatgagaccatccaacttcaactacaacatcagggccccg
gggccttaccaacgctccatgcaacagtactactacccgtttcccccggtggggccggtg
ttgtaccacatggagctgaacatcgggggccagcagttccacgggaaggggcgcacgcgg
cagcttgccaaacatgacgccgctgccaaggcactgaagactctacagaaagagcccata
ctgctgcagcagctgcctgagacgaatggagaagacacagagaacttcaataaatcagaa
atcagccaggtgtttgagatcgcactgaagaggaacatgcctgtcaactttgaggttctg
aaggaggcaggcccgcctcacatgaagagcttcatggtgtgtgtggcggtgggtgagttc
tgtggcgagggcgagggcaagagtaagaagatcgctaagaagctggcagctacagccgtg
ctggaggaactgaggagactgccccagctgtcccccagcgtggagaagattcagccagca
cgtattaagaagaaaaccaagtccattattaagctgcagaccagtccagagtatgggcag
ggcatgaacccaatcagcagactggctcagatccagcaggctaagaaagagaaggagcca
gagtacagcatgatgacggagagggggctgcccagacgcagggagttcgtcatgcaggtg
actgtgtgtggccattgtgcggagggcttaggccccagtaagaaggtagcgaagaggaac
gcagcagagaagatgcttgagcttcttggtttcaaagtgcctccgcctcagccccacaaa
cctgcgctcaaaacggacgaaaaggtcctgcagaagaaaaatggagacgggaggaaagtg
accttcttcgagccgggctctgtagaagagagccagtcgctgggctccaaggcagagaac
taccgccagccctacctcagccaccagcagctcccagcaggcatcctgcccatggtggca
gaggtggcccaggctataggggccagccccagtctggggcaccagaacaagggttacggc
ccccggaccaaccctgccaaggccaccctgacggccatgatcgccaacgagctgctgtac
ggtggtacctccctgaccgccgataccatcctgaagagtcaaaacagtatggctcatcta
gtacctcacggacccctgaccagaccctctgaacagctcagctacctagccaacgtacaa
ggtctacaggtggattacaaagacttccccaaaaacaacaagaatgaatttgtatcgctg
atcaactgctcctcccagccgcctcttatcagccacggcattggcaaggacgtggagtcc
tgtcacgacatggcagccttgagtatcctgaaattactgtcagagctggaccagcagcag
caccagcagcagaccaatgacaggacagggagcggaccaacctctgggtgtggcaaacag
gacatggacggctgcgactctctcatcatcaaacaggctaactcaagcaacttgggacaa
cagactctggatggcactgtgtag
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