Oncorhynchus masou masou (cherry salmon): 135539788
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Entry
135539788 CDS
T10723
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03082
ATP-dependent chromatin remodeling
omm03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135539788
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
135539788
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omm01009
]
135539788
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omm03021
]
135539788
03036 Chromosome and associated proteins [BR:
omm03036
]
135539788
Protein phosphatases and associated proteins [BR:
omm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135539788
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135539788
SWI/SNF complex
135539788
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135539788
PBAF complex
135539788
SWI/SNF complex
135539788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
135539788
NCBI-ProteinID:
XP_064821986
LinkDB
All DBs
Position
1:24144787..24150075
Genome browser
AA seq
370 aa
AA seq
DB search
MALSKTFGQKPVKFQLEEDGDYYMIGSEVGNYLRMFRGSLYKRYPSLWRKLASVEERKKI
VESSHDHGYTTLATSVTLLKASEVEEIFEGNDEKYKAISISTEPPAYLREQKGKRNSQWV
PTLPNSSHHLDAVPCSTTINRSRLGRDKKRTFPLCFDDHDPAVIHENATQSEVLVPIRLD
MEIEGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDS
ILDEQTDQRVIVKLNIHVGNISLVDQFEWDMSERENSPEKFALKLCSELGLGGEFVTTIA
YSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGEADQWCPLLETLTDAEMEKKIRDQDRNT
RRMRRLANTW
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttagtaagacatttggacaaaaacctgtcaaatttcagcttgaagaagatggg
gattattatatgattgggtcagaggtaggaaattacctgcgtatgttcagaggttccttg
tataagagatacccatcactatggaggaaactggcatcagtggaggagcggaagaaaata
gtggaatcatcccacgatcatggttacacaaccttagctaccagtgtgacccttctgaag
gcatcagaggtagaggagatcttcgaaggaaacgatgagaagtacaaagctatctccatc
agcacagagcccccagcttacctcagggagcagaagggtaagcggaatagtcagtgggtc
cccacgctacccaacagctctcatcacctggatgctgtcccctgctccaccactatcaac
cgcagccgcttaggccgagacaagaagaggaccttcccgctctgttttgatgaccatgat
cctgcagtgatccatgagaatgccacccagtctgaggttctggttccaatccgactggac
atggagatcgaggggcagaagcttagggatgctttcacctggaatatgaacgagaagctc
atgactcctgaaatgtttgcggagatcctgtgtgacgacctggacctgaaccccttggcc
tttgtcccagccatcgcctcagccatccgccagcagatagagtcctatcccacagacagc
atcctggatgaacagactgaccagagggtcatcgtcaagctaaacatccacgttggaaac
atctcgctcgtggaccagtttgagtgggatatgtcagaaagggagaactccccagagaag
tttgccctgaaactgtgctcggagctgggcctagggggagagtttgtcaccaccattgct
tacagcatccgaggacaacttagttggcaccagaggacatacgctttcagtgagaacccg
ctgcccacggtagagattgccatccggaacacaggtgaagctgaccagtggtgcccactg
ctggagacactgacagatgcagagatggagaaaaagatcagggaccaggatagaaacact
cggcgcatgagacgactggcaaacacatggtag
DBGET
integrated database retrieval system
