Oncorhynchus masou masou (cherry salmon): 135539871
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Entry
135539871 CDS
T10723
Name
(RefSeq) tubulin alpha-1C chain isoform X1
KO
K07374
tubulin alpha
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04145
Phagosome
omm04210
Apoptosis
omm04517
IgSF CAM signaling
omm04530
Tight junction
omm04540
Gap junction
omm04814
Motor proteins
omm05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135539871
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
135539871
09143 Cell growth and death
04210 Apoptosis
135539871
09144 Cellular community - eukaryotes
04530 Tight junction
135539871
04540 Gap junction
135539871
09142 Cell motility
04814 Motor proteins
135539871
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135539871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135539871
03036 Chromosome and associated proteins [BR:
omm03036
]
135539871
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omm04812
]
135539871
04147 Exosome [BR:
omm04147
]
135539871
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135539871
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
135539871
Cytoskeleton proteins [BR:
omm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
135539871
Exosome [BR:
omm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135539871
Exosomal proteins of other body fluids (saliva and urine)
135539871
Exosomal proteins of colorectal cancer cells
135539871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
135539871
NCBI-ProteinID:
XP_064822132
LinkDB
All DBs
Position
5:54225260..54230762
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGKMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRSGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPCN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSVEGEDEGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctcggtccatgtgggccaggctggagtccagatcggcaatgcatgc
tgggagctgtactgtcttgagcatgggatccaaccagatggcaagatgcccagtgacaag
accattggaggaggtgacgactcctttaacaccttcttcagtgagactggagctggcaag
cacgtccccagggctgtgtttgtggatctggagcccactgtcattgatgaggtgcgatct
ggaacttaccgccagctcttccaccctgagcagctgatcactgggaaggaggatgcagcc
aacaactacgcccgtgggcattacaccatcggcaaagagatcatcgacttggttctggac
aggatccgcaaactggctgaccagtgcactggcctccagggcttcctggtcttccacagc
tttggaggtggtaccggttctggtttcacttccctgttaatggaacgcctgtctgttgac
tatggcaagaagtccaagcttgagttctccatctacccagctccccaggtgtccacagct
gttgttgagccctacaactcaatcctgaccacccacaccaccctggagcattctgactgt
gctttcatggtagacaatgaggctatctatgacatctgccgtaggaacctggatatcgag
cgtccttcctacaccaacctgaacaggttgatcagccagattgtgtcctccatcactgct
tccctccgattcgacggtgccctcaatgttgatctgacagagttccagaccaacttggtg
ccctatccccgtatccacttcccccttgccacctatgccccagtgatctcagcagagaag
gcttaccatgagcagctgactgtttcagagatcacaaatgcctgttttgagccatgtaat
cagatggtgaaatgtgacccacgtcacggcaagtacatggcctgctgtctgctgtatcgt
ggtgacgttgtgcccaaagacgttaacgctgccattgccaccatcaaaacaaaacgctcc
atccagtttgtagactggtgcccaactggtttcaaggttggtatcaactaccagccccca
actgtggtacctggtggagatctggccaaggtccagagggcagtgtgcatgcttagcaac
accactgcagtggctgaggcttgggcccgccttgaccacaagtttgacctgatgtatgcc
aagcgtgcattcgtgcactggtacgtaggtgagggtatggaggagggagagttctctgag
gccagggaagacatggctgccctggagaaagattatgaggaggtgggcgcagacagcgtg
gaaggagaggatgagggagaagagtactaa
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