Oncorhynchus masou masou (cherry salmon): 135539901
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Entry
135539901 CDS
T10723
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
135539901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135539901
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135539901
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135539901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
KH_DTX3L
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
zf-RING_11
RNase_E_G_Thio
zf-RING_4
zf-rbx1
Calpain_u2
DZR_2
Endonuclease_7
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
135539901
NCBI-ProteinID:
XP_064822210
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All DBs
Position
5:complement(55652767..55670825)
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AA seq
967 aa
AA seq
DB search
MSDVEDMDTSTAEMNRNHEVSGPEQQRPHDLSQIQIHVPTGTSSGPVTVIQSQPQRSSVS
QSAFTYKAEIPEDVSEEDASARETADRFSQTFGGGTPSATCVNIPSSDDDPDLYQADNDF
KPHSSSSKEMSVDYPAEGDNGSAGNKQSQRDQHSPINPQSTQDVDPDLYQAPLYDPRHFG
NPRSSSSKEMSVDYPAEEDNGSARNKQSQRDQHSPINPQSTQDVDPNQAKDETEEKQTTL
DEATVYIRVLWPGKAILSWKSILQKSLQSWLNNNFKDTDCTVERLNGDLAEVKIHPPSVV
EDLLKLKETRVIFKDKAKTSATVRFQSNSEPSSMEDLPPTSNMPQDVKLPITVSASIDIG
GYKPEVRADLHRHNHTIDHKLAVKWSFDEVNQFHREFTKTVREVETSPGADWNDNAEAAQ
SMTHNGMKTHEDPGQKEITFPVPLIHFVYLNQAYRKEMEDIEKRNGVEINAEVKVSIKED
TQKTGRDVMLAKAHQEFSDLFQKYVVDLDSISTHLTPGDPGDLMNTLKNIQNEETRLVLN
VSANGCVVFGPAQSIMAVEKALGMKTTVMTFGMDHSSTEKASGFAGGPVLRSPKTPRMIE
MNIKDPLLSHGLAMNQTHWDLMKSAFHEKITAIKNKFRVDFMEEKYPGKLKIKTRPTTSH
TPPAVSLESHAIRALMHLYQKVATSAMSCHVLDPTHAKTVGDKLEEIHPRHRCVWAGENY
GPWRLIGLPQHLGPAVKELEMMLKRPMFKEEDKHKIEYPGDRSSTGAAMGGAVGDGGATG
GPEDGNCSICMDRFINKRKLSCSHEFCTDCLRKAVEFSGPRCPLCNDVFGKVEGDQPEGT
MNVKHESYRCIPGYRGSGMIVISYNIPSGKQTKKHSNPGKGFIGAHRIAYLPDNQEGNEV
LKLLERAFNQKLIFTVGTSRTTGTDDCVTWNDIHHKTNIDGGAQVFGYPDPDYLSRVKSE
LKAKGIE
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgtagaggacatggatacatcaactgcagagatgaacagaaaccatgaagtc
tctggaccagaacagcaacgaccccatgacctttcgcaaatacagattcatgtgcccaca
ggaacatccagtggccctgtaacagtgatacagtcacagcctcaacggtctagtgtttct
caaagtgcttttacttacaaggcagaaatacccgaggacgtgtctgaagaagacgcatca
gcccgagagactgccgatcggttctcccagacttttggaggagggacaccttcagcaacc
tgtgttaatatcccaagctctgatgatgaccctgacctgtatcaagcagataatgacttt
aagcctcattcatcctcttccaaagagatgagtgtggattatcctgctgaaggagataat
ggctctgctggaaacaaacaatcacagcgagatcaacattctcccatcaacccccaaagc
actcaggatgtggacccagacctgtatcaagcacccctgtatgaccccagacactttggc
aatcctcggtcatcctcttccaaagagatgagtgtggattatcctgctgaagaggataat
ggctctgctagaaacaaacaatcacagcgagatcaacattctcccatcaacccccaaagc
actcaggatgtggacccgaatcaggcaaaggatgagaccgaggaaaagcagaccacttta
gatgaggctacagtctatatccgtgtgttgtggcctgggaaagcaatattgtcatggaag
tctatacttcaaaaaagtctccagtcgtggttgaataataactttaaagatacagattgc
accgtggaaaggctgaacggagacttggccgaagtcaagatacatcccccatcagtcgtt
gaggaccttctgaagctgaaggaaacgcgggtgatcttcaaagacaaggccaagacatca
gccactgtgcggtttcaatcaaacagtgaacccagctcaatggaagacttgcctccaaca
tccaacatgccacaggatgtcaaactcccaataactgtaagtgctagcattgacatcggt
ggctacaaacctgaagtacgggctgaccttcaccgtcataaccacaccatcgatcacaag
ttggctgtaaaatggagctttgatgaagtgaaccagttccacagagagtttaccaagacc
gtcagggaagtggaaacctcgccaggagcggattggaacgataatgcagaagcggcacaa
agcatgactcacaatggaatgaagacccatgaagaccctgggcagaaggaaattaccttt
ccagtaccactgatccactttgtgtacttaaatcaggcctaccggaaggagatggaggac
atagagaaaagaaatggagtcgaaatcaatgcagaagtgaaggtgtccatcaaagaggac
acacagaaaacaggcagagatgttatgctggccaaagcccaccaggagttcagtgacctc
ttccagaagtatgtagttgatttggacagcatttccacccatctgacacctggggatcca
ggagacctcatgaatacactgaaaaacatccagaatgaggagaccaggctggtactaaat
gtgtctgccaatggctgcgttgtgtttgggccggctcagagcatcatggcagtcgagaag
gctcttgggatgaagactacagtaatgacatttggaatggatcacagctccacagagaaa
gcatctggatttgctggaggacctgttttgagatctccaaaaacaccacggatgattgag
atgaacatcaaagatccacttttgtcacatgggctggccatgaaccagactcactgggat
ctaatgaaatctgcctttcatgagaaaataacagcaatcaaaaataaatttagagtggat
ttcatggaggaaaagtatccaggcaaattaaaaattaaaaccagacctacaacatcacac
actccaccggcagtctctctggaaagccacgccatcagagctctcatgcacctctaccag
aaggttgcgacatcagcgatgagctgccacgtgctggaccctacccatgcaaagactgtg
ggggacaagctggaggagatccaccctcgacaccgctgtgtctgggcaggagaaaactat
ggtccctggaggctgatcggcctaccgcaacatttgggccctgctgtcaaagagctagag
atgatgctgaaaaggcctatgtttaaagaagaagacaagcacaagattgagtatcctggc
gacagatccagcactggagcagccatggggggagcagtcggagatggaggagcaacagga
gggcctgaagatggtaattgctccatatgcatggacagatttatcaacaagaggaagttg
tcctgcagccatgagttttgcacagattgtctgaggaaggcagtggaattctcaggcccc
agatgtcctttgtgtaatgatgtgtttggaaaggtggagggagaccagcctgagggaaca
atgaatgtgaaacatgaaagttaccgctgcatacctggataccgtggctcaggcatgata
gttatcagctataatataccaagtggaaaacagacgaagaaacattccaaccctggaaaa
gggttcattggggcccatagaatagcttatctccctgacaaccaggagggcaacgaagtg
ctgaagttactggagagagctttcaaccagaagctgattttcacagttgggacctccaga
accactgggacagacgactgtgtgacatggaacgacattcaccacaagaccaacatcgat
ggaggggcacaagtttttggttatcctgaccctgactacctgagcagagtgaagagtgag
ctgaaagccaaaggcattgaatga
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