Oncorhynchus masou masou (cherry salmon): 135539992
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Entry
135539992 CDS
T10723
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135539992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omm03021
]
135539992
03036 Chromosome and associated proteins [BR:
omm03036
]
135539992
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135539992
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135539992
PBAF complex
135539992
GBAF(ncBAF) complex
135539992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
135539992
NCBI-ProteinID:
XP_064822351
LinkDB
All DBs
Position
5:complement(59715556..59731562)
Genome browser
AA seq
1063 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTRLPTKSFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPVIYLSSDIEAKLLGKLKDIIKRHQGSVTEDKTSSSHVVVP
IPASLEEEEWVRLVMKRDKQVLLHWGYYPDSYDTWISASEVEAAVEEAPSPEKPRKVHAK
WILDLDQFNEWMNEEDYEVGEGGPKRKRISAKTLTDEVTTPGDERRDKKPGSAKKRKRSP
SPSPTPPPQESKKKNTKKGCGPTTPYTKSKRGQREEEPEDLTKDLDEPSPVPAVEEVTLP
KTANTKKDSESTPVKGGTMTDLDEQEDESMETAGKEEEEGSPSVKGEPVKGSDLHEDNVT
EQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQ
EYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTP
SSLVPLQPKASQTPAAQQILSFPDKVKEKQPADLQNFGLRTDMYSKKTGLPKSKTAASAM
RDWTEQETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDTSSSLGP
LAYQPVPFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRR
VEEAARTSGRQDPLYGLEGSGIAGTSLEEGEKPEESSEESKSDSQSSEEKRETKENKEGA
MEEGEKQGENGKKEEERGREGEGEGEQEAEKTDSEMGDGEKDKEGKEGSEESQREGESEG
ERKAKVERDVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKL
RHFEELETIMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQQHSQTGGP
HSAPAPTGPPPPPQGPSATQSQPTLSTPAPQPAPSPAPPTTSIPSSAQPAEPQAPPSGPH
TSPPRPPGQPPTAHSSTTPTLHEPSAPLPEDTHHSSAPVPPPQ
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggcccgaacgtaaaatatttcgaagcgtctgataca
gtctcgcagttcgacaatgtccgcgtttggttgggcaagaattataaaaagtacatccag
gcggagccccccaccaacaagtctctgtccagcctggtggtccagctgctgcagtttcag
gaggaggtgttcggacgacatgtcagcaacccacctctcaccaggttgccgactaagagt
ttcctggactttaagtctggtggggctctctgccacattctggctgcagcctacaagttc
aagagcgatcagggctggcgcaggtttgactttcagaatccttctcggatggaccgcaat
gtggagatgttcatgactatcgagaaatctctagtacagaacaactgtctgagtcgacca
gtgatctacctgagctctgacattgaggccaagctactggggaaactgaaggacatcatc
aagaggcaccagggctcagtgactgaagacaagacgtccagctcccatgtggtggttccc
atccctgccagtctggaggaggaggagtgggtgcgtctggtaatgaagagagacaagcag
gtgctgctccactggggatactatcctgacagctatgacacctggatctcagccagtgag
gtggaggctgctgtggaagaagcgcccagcccagagaaacccaggaaggtccatgccaag
tggatcctggaccttgaccagtttaatgagtggatgaatgaggaggactatgaggtgggg
gaggggggccccaagaggaagagaatctcagccaagaccctgacggatgaggtcaccacc
ccaggggacgagcgtcgtgacaaaaagcccggcagtgccaagaagaggaagcgctcaccc
tccccctcgcccaccccaccaccccaggagagcaagaagaagaacacaaagaaagggtgt
gggcccaccaccccgtacactaagtctaagcgaggccagagagaggaggagccggaggat
ctgactaaagatctggatgaaccatcacctgtacctgcagtggaggaggtcaccctacct
aagacagccaacactaagaaagactctgagtcaacaccagtaaagggaggtaccatgaca
gacctggatgagcaagaggatgaatccatggaaactgcaggaaaggaggaggaggagggc
tctccaagtgtgaagggagagccggtaaaagggtcggaccttcatgaggacaacgtgacc
gagcagacccaccacatcattatccccagctatgctgcctggttcgactacaacagtgtc
catgctattgagcgtagagccctcccagagtttttcaacggaaagaacaaatccaaaacc
cctgagatttacctggcctataggaacttcatgatagacacttacaggctgaacccgcag
gagtaccttacctctaccgcctgtcgtaggaacctggccggagacgtgtgcgccatcatg
agggtgcatgcgttcctggagcagtggggtctgatcaattaccaggtggactcagagagc
cggcccacccccatgggccccccgcccacctcccacttccacgtcctggctgacaccccc
tccagcctggtgccactgcagcccaaggcctcccagactccggcggcccagcagattctg
tccttcccagacaaggtgaaggagaagcagccagccgacctgcagaactttggcctgagg
acagacatgtacagcaagaagactgggcttcctaagagtaagactgctgccagcgccatg
cgagactggaccgaacaggagacactactgctgctagagggtctagagatgtacaaggat
gactggaacaaggtgtcggagcacgtgggctcacgtacccaggacgagtgtatcctgcac
ttcctgcgtctgcccatcgaggacccatacctggaggacacgtcctcgtccctgggcccc
ctggcctaccagcccgtccccttcagccaggcaggcaaccccgtcatgagcaccgtggcc
ttcctggcctccgtagtggacccccgcgtggcctccgcagccgccaaatctgccctggag
gagttttcccgtatgaaggaggaggtcccagcagcactggtggaggcccatgtgaggagg
gtggaagaggcggcgcggaccagtgggagacaggaccccctctacggcctggaaggcagc
ggcatcgcaggcaccagcctggaggagggagaaaaacctgaagagagcagtgaggagagt
aaaagtgacagccaatccagtgaagagaagagggagaccaaggagaacaaagagggagcc
atggaagagggggagaagcaaggagaaaacgggaagaaggaggaggagagaggaagagag
ggagaaggagagggagagcaagaggctgagaagaccgactctgagatgggtgatggagag
aaggataaggaagggaaggagggctcggaggagagccagagagaaggagagagtgaggga
gagaggaaggctaaggtggagcgggatgtgggagaggggaacctggctaccgcagctgcc
tctgccctggctgctgctgccgtcaaagccaagcacctggctgctgtggaggagaggaag
atcaagtctctggtggctctgctggtggagactcagatgaagaagctggagatcaaactt
agacactttgaagagctggagaccatcatggaccgagagagggaggcgttggagtaccag
aggcagcagctgctggcagaccgtcagtcgttccacatggagcagctgaaatatgcagag
atgagggcgcgtcagcagcacttccaacagatccagcagcacagccagactggaggccca
cactccgccccggcccccactggccccccacccccaccccagggcccctcagccacccag
tcccagccaaccctcagtacccctgcaccacagccagctcccagcccagcaccccctacc
acctccatcccttcctctgcccagcctgctgagccccaggctccccccagtggtcctcac
acctcacctccccgcccgccaggccagccccccacggcccactccagcaccaccccaaca
ctccacgagcctagtgcccctctacctgaggatacacaccactcctcagccccagttccc
cctccacagtga
DBGET
integrated database retrieval system
