Oncorhynchus masou masou (cherry salmon): 135539996
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Entry
135539996 CDS
T10723
Name
(RefSeq) integrin beta-7-like isoform X1
KO
K06590
integrin beta 7
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04510
Focal adhesion
omm04512
ECM-receptor interaction
omm04514
Cell adhesion molecule (CAM) interaction
omm04672
Intestinal immune network for IgA production
omm04810
Regulation of actin cytoskeleton
omm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135539996
04514 Cell adhesion molecule (CAM) interaction
135539996
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135539996
09142 Cell motility
04820 Cytoskeleton in muscle cells
135539996
04810 Regulation of actin cytoskeleton
135539996
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
135539996
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omm04147
]
135539996
04515 Cell adhesion molecules [BR:
omm04515
]
135539996
Exosome [BR:
omm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135539996
Cell adhesion molecules [BR:
omm04515
]
Integrins
Integrin beta subunits
135539996
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
I-EGF_1
EGF_2
EGF_integrin
EGF_TEN
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
135539996
NCBI-ProteinID:
XP_064822356
LinkDB
All DBs
Position
5:59875590..59891709
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AA seq
763 aa
AA seq
DB search
MVGIFILGTFLLYCVGQKQIQGVPQGCVSQPSCSACLRSPGCAWCKHKDFLKSGESSERR
CDTAESLRTRRCEQMDIINPRLDPVFLKNNDLSSNSDNVVQLKPQNLLFKLRVGVPQTFN
VSFKRAEGYPIDLYYLMDLSFSMKDDLDTIKNLGQDILSALKKVTQKVRIGFGSFVDKVA
LPYVSQVKAKKNNPCPNRLNICQPAFSFQNILRLTEDVDEFKTRVSDQIISGNLDSPEAG
FDAIMQAAVCQSVIGWNNVTRILVYTSDDTFHIAGDGRLAGIFEPHDGMCHLNGTGFYDG
TKYDYPSVGQLARVLAANNIQLIFAVTEDSVAAYKALSKLIPQSVVGVLKNDSSNVVLLI
SEAYSNLSSTILLEHHEAPSDLDVTYKSHCTPEKGDNTHWQRRGECMNVKLNQQVNFTVS
LNISTCLKEKQTFSLKLQGISETLKVSVETLCDCDCQDREEQSSHCNEIGTLTCGICSCD
EGHLGQRCECERPKDMTSAESMAATCRQDNSSQLCSGHGSCECGMCMCQGTHRGNFCQCD
DNSCARHNNMLCGGNGQCECGTCKCNANYTGSACDCSTLTDQCGTVGKLCNGQGTCQCNQ
CQCNKDFFGINCSKIANACPKFLDCVTCELDNKKISGLKSNCSQLCGSVKLTWMKGPQEF
PCSKDTISYKVELLPDGNIQIFYADLPRSIDKTYVIIGSSVSSIIFIGIAVILISRLMLE
LHYRREYESFLKAKEAEVWQDMKNPLFQDATTVVMNPMHIQED
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggttgggatctttatattagggacctttctcttgtactgtgtgggacagaaacaaatt
caaggggtcccccaaggatgtgtatcccagccctcatgttcagcttgcctgaggagccct
ggatgtgcctggtgcaaacacaaggacttcctgaagtctggagagtccagtgagcggagg
tgtgacactgctgagtctctgaggaccaggcgttgtgagcagatggatatcatcaacccc
cgattagatccagtctttctgaagaataatgatctcagcagcaactcagacaatgtggtc
cagcttaagccacaaaacctcctcttcaaactcagagtcggagtccctcagaccttcaat
gtctcattcaagagagccgagggctaccccatagacctgtactacctgatggacctgtcc
ttctccatgaaggacgacctggacaccatcaagaacctaggccaggacatcctctctgca
ctgaaaaaagtcacccagaaggtccgcattggcttcggctcatttgtagacaaggtggct
ctgccatacgtcagccaggtgaaggccaagaagaataacccctgtcccaaccgcctgaac
atctgtcaacctgccttcagcttccaaaatattctgagactcacagaagacgtggacgag
ttcaagaccagggtcagcgaccagatcatctctggaaacctggactcccccgaggcaggc
tttgacgcaatcatgcaggcagctgtctgccagagtgtgattggttggaacaatgtcacc
cggatcctggtctacacgtcagatgacaccttccatattgccggggatggcaggctggct
ggtatattcgagcctcatgacggcatgtgccatctcaatggcactggcttctacgatggc
actaaatatgactacccatcggttggccagcttgccagggtcctggcagccaataacatc
cagctcatctttgctgtcaccgaggacagtgttgctgcctacaaggcattgagtaaacta
atccctcagtcagtggtgggggtcctgaagaacgactccagcaacgtggtcctgctcatc
tcagaggcctacagtaacctgtcctccaccatcttactggagcaccatgaagctccctca
gatctggatgtgacctacaaatcccactgtacccctgaaaaaggggacaacacccattgg
cagaggaggggcgagtgcatgaacgtcaagctcaaccagcaggtcaacttcactgtaagc
ctgaacatttcaacatgtctaaaggagaagcagactttttccctaaaactgcagggcatc
agcgagaccctgaaggtctctgtggaaaccctgtgtgactgtgactgccaagacagagaa
gagcagtcctcacactgcaatgaaattggaacactcacctgcggcatctgcagctgtgat
gagggtcacctgggtcagaggtgtgagtgtgagcggcctaaggacatgacctctgccgaa
tcaatggccgcaacatgtcgccaagacaactcctcgcagctgtgcagcgggcatgggagc
tgtgaatgtggcatgtgtatgtgtcagggcacccaccgcggcaatttttgccaatgtgat
gacaacagctgtgcccgccacaacaacatgctctgcggtggtaatgggcagtgtgaatgt
ggaacatgtaagtgtaatgccaattacacaggctctgcatgtgactgttccaccctcacc
gaccagtgcgggacggttgggaagctgtgcaatggccagggaacatgccagtgtaaccag
tgccagtgcaacaaagacttctttggcataaactgctcaaagattgctaacgcatgccca
aaattcctggactgtgtgacatgtgaattggacaataaaaagattagcggcctaaagagt
aactgcagccaactctgtggctcagtcaagctcacttggatgaagggaccccaggagttc
ccctgcagtaaagacaccatctcctacaaagtggagctgttgcctgatggcaacatccag
atcttctacgcagatctgcctcgctctattgacaagacttacgtgatcatcggcagctct
gtgtccagcatcatcttcatcggcatcgcagtgatcctcatcagcaggcttatgctagag
ctccactaccggagagagtatgaaagcttcctcaaagcaaaggaggccgaagtctggcaa
gatatgaaaaatcccttgttccaggatgccacgaccgtggtcatgaaccccatgcacatt
caagaggactga
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