Oncorhynchus masou masou (cherry salmon): 135540010
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Entry
135540010 CDS
T10723
Name
(RefSeq) RNA-binding protein 15-like
KO
K13190
RNA-binding protein 15
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135540010
03041 Spliceosome [BR:
omm03041
]
135540010
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
135540010
Spliceosome [BR:
omm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
135540010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SPOC
Nup35_RRM_2
RRM_3
RRM_10
Motif
Other DBs
NCBI-GeneID:
135540010
NCBI-ProteinID:
XP_064822374
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All DBs
Position
5:complement(60225240..60233592)
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AA seq
837 aa
AA seq
DB search
MKGKERSPVKKRSRILDDIRDRGGSHPTSKKMGTLSAAGSNGNSSVKSGGSVKRSLPSEK
RDCRDLDGHVSNRTGSSHGYANTTGSSSKLHISIALDPTTRTNSRGEPRPLPSNESEYKT
LKISELGSQLSDEDIEDGLFHEFKKFGDVSVKISRVNDERVAFVNFRRPDDAKAAKHARG
KLVLYDRPLKIDAVYMNRRRSRSPIEKDPYAGVAGHRHLHVQRPLSPTGLGYRDFRLQQL
ALGRLPPPPSLPRELEREREFSIYEARARPPFIPDCAAFCEEDLLSPEDDQRANRTLFLG
NLDVSVTENDLRRVFDRFGLITEVDIKRTSARGQNSTYGFLKFENLDMAHRAKITMSGKV
VCHNPIKIGYGKATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDTWAYIQYE
SLDAAQAACSHMRGFPLGGPERRLRVDFADTELRYQQQYLQPLPLPPHFDLVADSFVHRP
TLEAIRIRERSPPPPLRFRERELYNADWAGPAVCERVRGAAFEPVEHLERRSREPWSLER
ELQSRDQARKRRLLEDGRRPDRSPNSSEHGRRRHGTSLERSPGGSSRDGGRYSPPRSDRP
SPVREQRASLGRGPGDKRLRTDSPALPERDRKRKASDSCTSPVKREDRSDHPSSSMSSLQ
SKQGAGGQKLCQAWHGVLLLKNSSFPTSMHLLEGDLAVAARLLVESSTGGQVSQLKITQR
LRLDQPKLDEVSRRIKTAGPSGYSVLLAVPGSCEEGPQDVGSSTERPLKNLVSYLKQKQA
AGVISLPVGGTRDKDGAGVLHAFPPCDFSQQFMDASAKALAKTEEDYLVMVIVRGAS
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcaaggagcggtcgcccgttaaaaagcgctcgcggattctggacgatattcga
gaccggggaggaagccacccaacaagtaagaagatgggaacactctcggcggcaggcagc
aacgggaatagttctgtcaaaagtggtggttcggtaaaacggagtttaccgtctgaaaag
agagactgtcgagatttagacggacatgtgtcaaatcgaactgggagtagccatggatat
gctaatacaactggttcgagtagcaagctacacattagcattgctctggaccccacgaca
aggaccaattctcgcggggaaccgcggcctcttccgagtaacgaaagtgagtacaagact
ctaaaaattagcgagctaggctctcagttgagcgacgaagacattgaagatggattattt
cacgaatttaagaaatttggggacgtgagtgtcaaaataagccgagttaacgacgaaagg
gtggcatttgtgaatttcagaaggcccgacgatgctaaggcggccaagcacgcacgcggc
aagttggtactctatgaccgccctctaaaaattgacgcggtgtacatgaaccggaggagg
agccgatcccccatcgaaaaagatccatatgcaggagttgcaggacacagacatttgcat
gtccaaagacccctttcaccaacggggctaggatatagagatttccgactgcagcagcta
gctttgggccgcctcccccctcccccctccctccctagagaactggaaagagagagggaa
ttttctatctatgaagccagggcccggccacccttcatccctgactgtgcagctttctgt
gaggaggacctcctctcccctgaagatgatcagcgggccaacaggacgttgtttcttggc
aacctcgatgtctcagtgacagagaatgacttgaggagggtgtttgacaggtttgggttg
atcacagaggtggacatcaagcggacatccgctcgcggacagaacagcacctatggattc
ctaaagttcgagaacctggacatggctcaccgtgctaagatcaccatgtcaggaaaagtg
gtgtgtcacaaccctattaaaattggctatggcaaagcgacacccacaaccaggctgtgg
gtggggggtcttggcccctgggtcccccttgctgctctggctagggagtttgaccgcttc
ggcaccatcaggactatagactacaggaagggggacacgtgggcctacatccagtatgag
agcctggacgctgcccaggccgcctgctcccacatgcgtggctttcctctgggtggtcct
gagaggagacttagggtggactttgctgacacagagctccgctaccagcaacagtacctg
cagcctctccctctgccgcctcactttgacctagtggcagactcatttgtccaccggccc
accctcgaggccatcagaatcagagagaggagccctccacccccactccgcttcagggaa
agggaactgtacaacgcagactgggctggcccagcagtctgcgagagggtgcgaggggca
gcttttgaacccgtggagcacctggagaggcgttcacgtgaaccctggtctctggaacgg
gagctgcagagccgagaccaggcacgaaaacgtcgcctcttagaggatgggcgccgcccg
gaccgctcaccaaacagcagtgaacatgggcgtcgtcgtcacggcacctctctggagcgc
agccctggtggcagcagccgggacggggggcgctacagccccccacgctccgatagaccc
tctcccgtcagagagcagcgggccagcctaggccgtggccctggggacaagcggctgcgg
acagacagcccagccttaccagaacgggaccgcaaacgcaaagccagtgactcatgcaca
agccctgtaaagagggaggaccgctctgatcacccctcctcttccatgtccagcctgcag
tctaagcagggggccggggggcagaagctgtgtcaggcctggcatggcgtgctcctgctg
aagaacagcagcttccccacctccatgcacctgctcgagggggacttagctgtggcagcc
agactactggtggagagctccactggtggtcaggtgtcccagctaaagatcacccagcgc
ctgcgtctggaccagcccaagctggatgaggtgtcccgtcgcatcaagactgcaggcccc
agcggctattctgtcctcttggctgtgcctgggagctgtgaggaggggccccaggatgtg
ggaagctccaccgagaggcctctaaagaacctggtctcctacctgaagcagaagcaagca
gccggcgtcatcagcttgcctgtgggtggcacccgtgacaaggacggcgcaggagttctt
cacgctttcccaccctgtgatttttcccagcagttcatggatgcctcagctaaagccctt
gccaaaaccgaagaggactacctggtgatggtcattgtccgaggagcctcataa
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