Oncorhynchus masou masou (cherry salmon): 135540016
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Entry
135540016 CDS
T10723
Name
(RefSeq) serine/arginine-rich splicing factor 3-like
KO
K12892
serine/arginine-rich splicing factor 3
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03040
Spliceosome
omm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135540016
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135540016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omm03041
]
135540016
Spliceosome [BR:
omm03041
]
Common components
Common spliceosomal components
SR proteins
135540016
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
135540016
NCBI-ProteinID:
XP_064822382
LinkDB
All DBs
Position
5:60441170..60445979
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AA seq
170 aa
AA seq
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MGDPAMHRDCPLDCKVYVGNLGNNGNKTELERSFGYYGPLRSVWVARNPPGFAFVEFEDP
RDATDAVRELDGRTLSGSRVRVELSNGEKRTRNRGPPPSWSRRPRDDHRGRRGSPPARRR
SPRRRSFSRSRSRSLSRDRKRERSLSRDRNHKPSRSFSRSRSRSRSTERK
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgggagatccagccatgcatcgagattgccctctcgactgcaaggtctacgtgggaaac
ctggggaacaatggcaataagacagagctggagcggtcattcggctattatgggccactt
cgcagtgtctgggtagctaggaaccccccaggctttgcttttgtggaatttgaagatcca
agggatgcaaccgacgcagtgagagaacttgatggaaggacattaagtggttcccgtgtg
cgagtggagctgtccaatggtgagaaacgcacccgcaaccggggtcctcctccatcgtgg
agccgacgtccacgagatgaccatcgtgggcgtcgtggtagcccgcccgccaggcgcaga
tccccacgtaggaggagcttcagccgcagccgaagcaggtctctctccagagacaggaag
agggagagatctttgtcccgggacaggaaccacaaaccctcaagatcattttcccgatca
aggagccgctccaggtctacggagagaaagtaa
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