Oncorhynchus masou masou (cherry salmon): 135540168
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Entry
135540168 CDS
T10723
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03022
Basal transcription factors
Brite
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
135540168
Coactivators
SAGA/TFTC/STAGA complex
135540168
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
135540168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135540168
NCBI-ProteinID:
XP_064822671
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Position
5:70032900..70045597
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AA seq
863 aa
AA seq
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MDASSSESDSSARHGQGKTVAVSASIITPLPNHGGKVASSATQTLNGGSLMNCHNSGSAV
SLTGTPLSSSCTSSGNASVAVTVVNNGPGLSKGHASAVMPPSLNTTIIQTSFVNSPNVVT
SSHAASLGTGPAISHIVRPSMQTAGSGTAMNGPNAGLPFDCLNNGQSPTSVAVSAGSHII
MAEAPKTSIQTAHDSCAVTNPSFQSAPRASTPVTVAASPGGSRSIAQQVLAPRHPQTSPN
QPNVQNIQLPPGMVLVRSESGQLLMIHQQTLAQMQSQSQGVMAPRPATPTSTPPFQITSV
QAPGMPILTRQVTPTTIIKQGSPVPTSAPVTTTLQKPPVTTTLQRPPVLQSPMIVVGAAA
GTSMGTALPGATQRTVTASPGTTVTLATETMENVKKCKNFLSTLIKLASSGKQSSETAAN
VKDLVKDLLEGKIEVEDFTNRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQHSG
LQQQASATTPTTVVLDSPALRPAAPTIRPHLQPVISKQGLTTPMVLQPRQQGAMVRPLQM
TPMVTLRGPPPHSHIMLGQPQVQLKQLQTVNPGMLTGSKSSPGAASLATVVQKNKLKEAG
GTFRSAMDDDDINDVASMAGVNLSEESARILATNSELVGAVTRSCKDEAFLHTSTLTSRI
LEIGKKFGVSDLGPEVVSYVSHASQTRLQNLLEKVSEVAQQRNINFKEDSRYEQTSDMRA
QIKFFEQLDQMEKQRKEEQEREILMKAAKSRSRQEDPEQLRLKQKAKEMQQQELFQLRQK
EANLTALAAIGPRKKRKMEAAAAAAGAEGSGSSPAASGSGSSGASRQFIRQRITRVNLRD
LLFCLENERDTSHSHLLYKGFLK
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggatgcctcatcgagtgagtcggactcatcggcacgacacggccaaggaaagactgtt
gctgtcagtgccagtataataactcctctcccaaaccacggggggaaagtagcctcttcc
gcaactcaaactttgaatggaggcagtttaatgaactgtcacaattcaggaagcgctgtc
tctctcactgggacaccgctgtcaagtagttgcacgagtagcggcaatgcctcggtagct
gtcacagttgtcaacaacgggccggggttgtcaaaaggacatgcgagcgcagtaatgcca
ccttcattgaacaccactatcatccagacatcattcgtgaactctccgaatgttgtcacc
tcgtctcacgctgcgagtctgggcactggacctgccatatcacatattgtgaggccatct
atgcaaactgcgggatcgggtacagcgatgaatggtcctaatgcgggattgcctttcgat
tgcctgaacaatggtcagtcgcccacgtctgtggctgtcagtgcggggtcgcacataatc
atggcagaggcgcccaaaacaagcatacagactgcacatgactcatgtgctgtaacgaac
ccgtcgttccagagcgcaccgagggcttccactccggtgacagtggctgcgagcccggga
gggagccgttctatcgcgcaacaggtgttggcgcctcggcacccacagacatccccgaac
cagcccaacgttcagaacatccagcttcccccaggtatggtcctggtgcgcagtgagagt
gggcagctgttaatgatccaccagcagaccctggctcagatgcagtcccaatcccaggga
gtcatggccccccgcccagccacccccaccagcactcctcctttccagatcacctcagtc
caggctcctggaatgcccatcctcactaggcaggtgactcccaccactatcatcaagcag
ggctcacctgtgccaacctctgctcctgtcaccaccacactccagaagcctcctgtcacc
accacactccagaggcctcctgtcctacagagtcccatgattgtggtaggagctgctgca
ggcacttctatggggacagcgctaccaggggccacccagaggaccgtcaccgcatcaccc
gggaccactgtcaccttggcaacggagacgatggagaatgtgaagaaatgcaagaacttc
ctgtctacattaatcaagctggcgtccagcgggaagcagtcctcagagactgccgccaac
gttaaagacctggtcaaagatctcctggaagggaagattgaagtcgaggatttcaccaac
aggttatacagagagctcaactcctcacctcagccttacctcgtgcctttcctcaagagg
agccttcctgctctgcggcagctcaccccagactcagcagccttcatccagcacagtggg
ctccagcagcaggcctctgccaccacccccaccactgtggtactggacagcccagccctg
cgccctgcagccccaaccatcagaccacacctccagcctgtcatcagcaaacaggggctg
actaccccaatggtgctccagcctcggcagcagggggcaatggtaaggcctcttcagatg
acccccatggtgaccctcagaggaccgcccccccacagtcacatcatgctgggacagcca
caggtgcagctcaaacagctacagacagtgaatcctggaatgttgactggatctaagtcg
tctcctggtgctgcctctctggccactgtagttcagaagaacaagctgaaggaagctggg
ggcacgttcaggtcagctatggatgacgatgacatcaatgatgtggcatctatggctggg
gttaacctgtctgaggagagtgcccgtatcctggcaaccaactccgagctggtgggagcg
gtgacacggtcctgtaaggacgaggccttcctccatacctccacactgaccagtagaata
ctggaaataggtaagaagtttggtgtgagtgatctggggccggaggtagtgagctacgtg
tcccacgcctcccagaccaggcttcagaacctgttggagaaagtttctgaggtggcccag
cagaggaacatcaacttcaaggaggacagtcggtacgagcagacgagcgacatgcgtgcc
cagatcaagttctttgagcagctggatcagatggagaaacagaggaaagaggagcaggag
agagagattctgatgaaggcagcaaagtctcgttctcgtcaagaagaccctgagcagctg
cggttgaaacagaaagccaaagagatgcagcagcaggagctgtttcagttgagacagaag
gaagctaacctgacggcgctggcagccatcggccccaggaagaagaggaaaatggaggct
gcagccgctgcagctggagctgagggctcagggtccagtcccgctgcgtctggtagtggt
agttcaggagcatccagacagtttatccgccagcgcatcactcgtgtcaacctcagggac
ctgctcttctgtttggagaatgagagagacaccagtcactcccatctcctctacaaaggc
ttcctcaaatag
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