Oncorhynchus masou masou (cherry salmon): 135540194
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Entry
135540194 CDS
T10723
Name
(RefSeq) host cell factor 1-like isoform X1
KO
K14966
host cell factor 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03083
Polycomb repressive complex
omm04980
Cobalamin transport and metabolism
omm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
135540194
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
135540194
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135540194
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omm01009
]
135540194
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135540194
03029 Mitochondrial biogenesis [BR:
omm03029
]
135540194
Protein phosphatases and associated proteins [BR:
omm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135540194
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
135540194
HMT complexes
COMPASS/SET1 complex
135540194
MLL-HCF complex
135540194
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
135540194
Mitochondrial biogenesis [BR:
omm03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
135540194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
135540194
NCBI-ProteinID:
XP_064822727
LinkDB
All DBs
Position
5:complement(71400989..71416114)
Genome browser
AA seq
1759 aa
AA seq
DB search
MHRFWSQQSIARAVFTLQNVFWLHFASINNRPDQNLSILFWNALLALFFFPSEEDMTFPG
SMVSGTTGSTLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNT
ATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKKLK
AKSPKNGPPPCARLGHSFSLVGNKCFLFGGLANDSEDPKNNIPRYLNDLYTLELRAGSSV
VGWDIPITYGVLPPPRESHTAVVYTEKESKKSHLIIYGGMSGCRLGDLWTLDIDTLTWTK
PSVNGTSPLPRSLHSAITITNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSM
AWESVLMDTLEDNIPRARAGHCSVSINSRLYVWSGRDGYRKAWNNQVCCKDLWYLETERP
HAPSRVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPAAAAAISPALTATSSLPGNLP
KSPAAPSAQNLPHTAILKVAAPQSGTGTSLVTVRANQAVKSPVTVTSLPPGVRMMVPAQT
AQGTPIGNSPQMSGMAALAAAAAATQKIPPSSGTGLNLPAGATLVKTMAVSPGSTTVKMS
SPLMVSNPATRMLKTAAAQVGTATVSSPNSPNRPIITVHKSGTVTVAQQHQVVTTMVGGV
TKTITLVKSPLTMGGSGTLQISSLGKMISVVQTKPVQTSAVTGQASTNPLSQLIQTKGSL
PAGTILKLVTSADGKPTTIITTSQAGATGNKPTILNISGMSPTTTKQGTTIIKTIPMSAI
MNQPGATVTSSTGKMPYTILTTKMMTTGTPGKIITTMPKLGTVTGQQGLTQVVLKGAPGQ
PGTILRTVPMGGVRLVTPVTMTSVKPNVTTLVVKGTTGVTTLGTVTGTVSSSLAGGSLAS
ANASLATPITTLGTIATLPSQVINPTAITVSAAQACLTTVTTLSTSTMSVNQPTQVTLIT
TPSGVEAQPVQDLPVSFLASPTSEQPSTEAGDAPGTVTMVCSNPPCETHETGTTNTATTA
SANMSVCSNPPCETHETGTTNTATTASANMSVCSNPPCETHETGTTNTATTASANMSVCS
NPPCETHETGTTNTATTSSTNMGGAMRATTSAYPGTATGNQGPENLRTGTTVTPATARSN
MGSAQTGTVQSPKQPAVGLTVCSNPPCETHETGTTNTATQSSSGMGNGKTNTVQKVCSNP
PCETHETGTTNTPSQASSNMAGNQTGTVTVQGVCSDPPCETHETGTTNTATTATADGADG
GTSSTETPSTTASGTTPATIQSRAITTVTQSTPAPGPSVPVMLKSISSITEGAAVSTEEP
MQTDAATEGGDTAMETGLPPELMSEGQIGTGLSAEELAVTAAAEAAAQAAATEAAQARAI
QAVLQAAQQATMNEGDSGSDRQQTTTIPIVLTQQELAALVQQQQQLQEAQAQAQAQQQGN
AQALPTEGLAPADSLNDPTSESNGHNEMAAAASSDVASLLPRTSTETLAPSSTFAVSSPA
NLQPATSLAEVANGIEGGKLYPQPAPIKTLVKKENQWFDVGIVKVTNMVVTHFFIPGDDS
QVEDDSGAIPDYNQMKKMELQPGTAYKFRVAGINACGRGSFSEISAFKTCLPGFPGAPCA
IKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSTQTAEPKTSTPGQLAFMRVYCGPNP
SCLVQSTSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESSKDGASAKPAPKRP
AVSSPDVKAAGQKKARTDQ
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggttttggtcccagcaatcgattgcacgtgcagtcttcactttgcaaaatgtg
ttttggcttcacttcgcaagtatcaacaatagacctgatcagaacttgtcaatattgttt
tggaatgctcttttagctctatttttctttccatctgaagaggacatgacatttcctggt
tcaatggtgtctgggaccacaggctcaactctgcagccacgatggaagcgggttctcgga
tggtctgggcctgtgcctcggccaagacatggtcatagagccgttgctataaaggaattg
atggtggtttttggaggaggaaatgaaggaattgtggatgaattgcatgtctacaacaca
gcaacaaaccaatggtttatccctgcggttcgtggtgatattccccctggatgtgctgca
tacggttttgtttgtgatggcacccggcttctggtttttggtggaatggtggaatatgga
aaatacagcaacgatctctatgagctacaggccagcagatgggaatggaaaaagttgaaa
gctaagtctcccaaaaatggcccacctccctgtgctcgacttggtcacagtttctctctg
gtgggcaacaagtgcttcctgtttggagggctggctaatgacagcgaggaccccaagaac
aacatccctagatacctgaatgatctgtacaccctggagcttcgtgctggctccagtgtt
gtaggctgggatataccaattacttatggcgttttgccgccacctcgcgagagccacact
gctgtagtgtacacagaaaaggagagcaagaaatctcaccttatcatctatggagggatg
agtggctgtcgtctgggagatctatggactcttgacattgacaccctgacctggaccaag
ccatcggtgaatggcacatcgcctctgcccaggagtctccactctgccatcaccatcaca
aacaagatgtttgtttttgggggatgggttcccctggttatggatgacgtgaaggtggca
acacatgagaaagaatggaagtgcacaaacactctggcctgcctaaatctggactccatg
gcctgggaatcagtgttgatggataccttggaggacaatatccccagagcccgggcagga
cattgttctgtgtccatcaactctaggttgtatgtctggagtggccgtgacggttaccgt
aaagcatggaacaaccaagtctgctgtaaagacctctggtatcttgagacagagaggcca
cacgctccctcgagagtgcagcttgtccgtgccaacaccaactccctggaggtgagctgg
ggcgctgtgtccaccgcagacacctacctgctgcagctgcagaagtacgacatcccagct
gccgctgctgccatctccccggccctcaccgccacctcttctctaccagggaacttgccc
aaaagcccagctgctccctctgctcagaacctaccacacacagccatcttgaaggttgca
gcccctcagtctggcacaggtacctcccttgtcactgtgcgagccaaccaggctgtgaaa
tcccctgtcactgtgacatcacttcctccaggggttcggatgatggttcctgcccagact
gcccaaggaacgccaatcggcaatagtcctcagatgagtggcatggcagctttggctgca
gctgcagcagcaacacaaaagatcccgccctcttcaggcactgggctcaaccttccagca
ggtgccaccctcgtcaaaacgatggctgtctcccctggctccaccacagtcaaaatgtca
tctcctctcatggtcagtaacccagccactcgcatgctgaagactgctgcagctcaggtg
ggcacagcgactgtatcatcacccaactcgcccaaccgacccatcatcactgtgcacaag
tcaggcacggtcaccgtagcccagcaacaccaggtggttaccaccatggtgggaggagtc
accaagacaatcaccctggtcaagagcccccttacaatgggaggcagcggcactctgcag
atctccagccttggcaagatgatatctgtggtacaaaccaagccagtgcagacatcagct
gttacaggccaggcttccactaaccctctatcacagctcatacagactaagggttctctc
cctgctggcaccatactgaagctggtgacttcagcagatggcaagcccaccaccatcatc
accacgtcccaggcaggggccacagggaacaaacccaccatcctgaacatcagcggcatg
tcgcccaccacaaccaaacagggcaccaccatcatcaagaccatccctatgtctgctatt
atgaaccagcctggagccacagtgaccagtagcacagggaagatgccctataccattctc
accaccaagatgatgaccactggcactccaggcaaaatcatcactaccatgcctaagctt
ggcactgtaactggccaacaggggctgacacaggtggttttgaagggcgctccgggccaa
cctggcaccattctccgcactgtacccatgggtggagtccgactcgtcaccccggttacg
atgacttctgtcaagcccaatgtaactacactggtcgtcaagggaacaactggtgtcacc
accctggggacagtcacaggcacagtctcctccagcctggcagggggcagtttagccagt
gccaatgcctctctggcaactcccatcaccaccctgggcaccattgccaccctgcccagc
caagtcatcaaccctacggccatcactgtgtcagcggcccaggcctgtctgaccacagtc
actaccctgtccacctccaccatgtcggtgaaccagccaacccaggtgactctcatcacc
acccccagtggggttgaggcccagccagtgcaggacctgcccgtgtccttcctggcctcc
cccacctctgagcagccctccactgaggccggggatgcccctggtactgtcactatggtc
tgctccaacccaccctgtgagacccacgagactggaaccaccaacacagccaccactgcg
tctgctaacatgtcagtgtgctccaaccctccctgtgagacccacgagactggaaccacc
aacacagccaccactgcgtctgctaacatgtcagtgtgctccaaccctccctgtgagacc
cacgagactggaaccaccaacacagccaccactgcgtctgctaacatgtcagtgtgctcc
aaccctccctgtgagacccacgagactggaaccaccaacacagcaacaacctcttccacc
aacatgggaggggcaatgagggcaaccacctctgcttaccctggaaccgccacaggcaac
cagggaccagagaacctgcgcaccggaaccaccgtcacccccgccacagcacgctctaac
atgggctcagcccagaccggcactgtgcagagtcccaagcagccagccgtgggccttaca
gtttgctctaacccaccctgcgagacacatgaaacgggcacaaccaacactgccactcag
tcctcgtccggcatgggtaacgggaagactaacactgtgcagaaagtgtgctcaaaccca
ccctgcgagacccacgaaacgggaaccaccaacaccccatcccaggccagttccaacatg
gctgggaaccagacaggaacagtgacggtgcagggggtgtgttcagaccccccctgtgaa
acccacgagactggcaccaccaacacggcaactactgccacagcagatggagcagacggt
ggcaccagcagtacagagactccctccactactgcatcaggaacaaccccagccaccatc
cagagcagagcgatcactactgtgacccagtccacaccagccccagggccctcagtacct
gtcatgctaaagtccatttcttcgatcactgagggtgcagcagtttccacagaagagccc
atgcagactgatgcggccacagaggggggagacaccgctatggagactgggctgccccca
gagctgatgtcagaggggcagataggaacaggtctgtctgcagaggagctggctgtgact
gcagcagcggaggcagcagcacaggcagcagccactgaggcggcccaggcccgggccatc
caggcagttctccaggcagcacagcaggccaccatgaacgagggtgattctggctcggac
agacagcagaccaccacaatccccatcgttctgacccagcaagagctggcagccctggtc
cagcagcagcagcagctccaggaagctcaggcccaggctcaggcccagcagcaaggaaac
gcccaagccctgcccactgagggcctggcccccgcagacagcctgaatgaccccacgtct
gagagcaatggacacaatgagatggctgcagctgcttccagcgatgtggcatcactgctg
ccgcgcacctccacggagaccctggccccctcaagcacatttgctgtttccagtccagcc
aacctgcaacctgcaacttctctagcagaggtggccaatggcatcgagggtgggaagcta
taccctcaaccagcccctatcaagacacttgtaaaaaaagagaaccagtggttcgatgtt
ggaatcgttaaggtgacaaacatggtggtcacacacttcttcatcccaggggatgattct
caagtagaggatgactcgggcgccattccagactataaccagatgaagaaaatggagctg
cagcctggcacagcttacaagttccgtgttgctggcatcaatgcttgtggtcgtggttcc
ttctcagagatctctgctttcaagacctgtctaccaggcttccccggagcaccttgtgcc
atcaaaatcagcaagagcccggatggtgcccacctcacctgggagcctccttcggtgaca
tcagggaagatcattgagtattctgtgtacctggccatccaaagcacccagacagctgag
cccaagacctccaccccaggccagctggccttcatgcgggtgtactgtgggcccaacccc
tcctgcctggtgcagtccaccagcctttcgaacgcccacatagactacaccaccaagcct
gccatcatctttcgtattgccgcgcgcaacgagaagggctatggccctgccacacaagtc
cgatggctgcaagagtccagcaaagatggtgcctcggcaaaacctgccccaaaaagacca
gcagtgtcctcacctgatgttaaggctgctggtcaaaagaaagcaagaacggaccagtga
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integrated database retrieval system
