Oncorhynchus masou masou (cherry salmon): 135540336
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Entry
135540336 CDS
T10723
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
135540336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135540336
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135540336
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135540336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
WWE_5
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-RING_Vps41
PHD_NSD
zf_RING_Vps8
zf-RING_5
zf-UDP
zf-RING_11
zf-ANAPC11
FANCL_C
Motif
Other DBs
NCBI-GeneID:
135540336
NCBI-ProteinID:
XP_064823001
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All DBs
Position
1:complement(25484866..25541924)
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AA seq
649 aa
AA seq
DB search
MARPGSGVLVSVNGLGYPPQNLARVVVWEWLNEHGRWRPYNVTTCHHIENVLKGDARGTV
VLGQVDAQLAPYVIDLQSMHQFRQDTGTMRPVHRNFYEPSSAPGKGVVWEWENDSGSWTP
YDMEICVTIQNAYEKQHPWLDLTSLGFCYLIDFNSMVQTNRQSQRKRRLRRRMDLAYPLI
MGSIPKSQSWPVGASSGQPCSCQQCILVNSTRAASNAILASQHRKLYGGATGPSGATGTL
TVVRQSNTFAGTTLWSPTSSAGTNNIQHNNISAGGGQAKAEQVQSLLSSANFPCSPPLPS
LPPAHGHSHAHAHSHGHHAVINGQNNLNRPGTQRISMGTARGAIPPGVPPLPVKNLTVSG
PVHPAIAGITGILMCAAGLPVCLTRAPKPILHPPPINKSDMKPVPGVNGIRRKTKKKHRR
GKNPEDVVRRYTEKVKVAPDEDCTICRERLVMSSGYEGVKGIKPEVVGKLAKCGHMYHLL
CLVAMYNNGNKDGSLQCPTCKAIYGEKTGTQPPGKMEYHVIPHCLPGYPETKTIRIVYDI
PAGLQTTEHPNPGKKFSARGFPRHCYLPDNNKGRRVLKLLIMAWDRRLIFTIGTSSTTGE
SDTVVWNEIHHKTEFGSNLTGHGYPDPNYLDNVLTELSAQGVGQDNLKD
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcacggccaggctctggggtgctggtgtcagtcaacgggctggggtacccccctcag
aacctggcccgggtggtggtgtgggagtggctgaacgaacatgggcgctggcggccctac
aacgtgacaacttgccaccacatagagaacgtactgaagggggatgcgcgggggactgtg
gtccttggacaggtggatgcccagcttgccccttacgtcatagacctgcagtccatgcac
cagttcagacaggacacaggcaccatgaggccggtccacaggaacttctatgagccgtcg
tcggccccggggaagggtgtggtgtgggagtgggagaacgacagcggctcctggacgccc
tacgacatggagatatgtgtgaccatccagaacgcctatgagaagcagcacccctggctg
gacctgacctctctgggcttctgctacctcattgacttcaacagcatggtccagaccaac
cggcagagccagaggaaacgccgcctgcgccgacgcatggacctagcctaccctctcatc
atgggctccatccccaagtcccagtcttggcccgtgggagccagctccggccaaccctgc
tcctgccagcagtgcatcctggtcaacagcacgcgggctgcctcaaacgccatcctggcc
tctcagcaccgtaagctgtatgggggagctaccgggccttcgggggctacaggcacgctc
accgtggtacggcagagtaacaccttcgctggaaccaccctctggtcccccacctctagt
gctgggaccaataatatacaacataacaacataagcgcaggaggaggccaagccaaagct
gaacaggtgcagtctctcctgtctagtgccaactttccatgttccccgccgctgccgtcc
cttccgcctgcacatggccactcccacgcccacgcccactcccacggtcaccatgccgtc
atcaatgggcagaacaacctgaaccggccgggcacccagcgcatttccatgggcactgcc
agaggagccatcccaccaggggtccctcccctccctgttaagaaccttactgtctctgga
ccagttcacccagcaattgcaggtattaccggtatcctgatgtgtgcggctggcctgcct
gtgtgtctgaccagggcccctaaacccattctgcacccgccgcccataaacaagagtgac
atgaagcctgtgcctggggtcaacggcattcgccgcaagaccaagaagaagcaccggaga
gggaaaaacccagaggatgtggtgcggcgatacacagagaaagtgaaagtagcccctgat
gaggactgcaccatctgcagggagaggctggtgatgtcatcaggctacgagggtgtcaag
ggcataaagccagaggtggtgggcaaacttgccaaatgtgggcacatgtaccatctgctg
tgcctggttgccatgtacaacaatggcaacaaggatggcagtctgcagtgccccacttgt
aaggctatctatggggagaagacaggaacacagccccctgggaagatggagtaccatgtc
atcccgcactgcctgcccggctacccagagaccaagaccatccgcatcgtctatgacatt
cctgctggcctacagaccacagagcatcccaatccagggaagaagttcagcgctaggggg
ttcccccggcactgctacctcccagacaataacaaaggcaggagggtcctgaagctcctg
atcatggcgtgggaccgccgcctcatcttcaccatcggcacgtccagcaccacgggagag
tcagacacagtggtgtggaatgagatccaccacaagacagagtttggctccaacctgacg
gggcacggctacccagaccccaactacctggacaacgttctgacagagctgtcagcccaa
ggggtgggacaggacaacctgaaggactga
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