Oncorhynchus masou masou (cherry salmon): 135540386
Help
Entry
135540386 CDS
T10723
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm00260
Glycine, serine and threonine metabolism
omm00630
Glyoxylate and dicarboxylate metabolism
omm00670
One carbon pool by folate
omm01100
Metabolic pathways
omm01200
Carbon metabolism
omm01230
Biosynthesis of amino acids
omm01240
Biosynthesis of cofactors
omm04981
Folate transport and metabolism
Module
omm_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
135540386 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
135540386 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
135540386 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
135540386 (shmt2)
Enzymes [BR:
omm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
135540386 (shmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
135540386
NCBI-ProteinID:
XP_064823075
LinkDB
All DBs
Position
5:complement(82442726..82472780)
Genome browser
AA seq
503 aa
AA seq
DB search
MLSLTLRQIARPLCLRAPVALSSVGARRSQHAATRSVEQEAPWTGQDSLAQDDPEMWNLL
RKEKDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGRRYYGGAEVVDQIELLCQ
KRALEAFDLDPALWGVNVQPYSGSPANFAAYTAVLNPHDRIMGLDLPDGGHLTHGYMSDT
KRISATSIYFESMPYKLNPATGLIDYDQLEMTARLFRPKLIIAGTSAYSRLIDYARIKKL
CTEVKAYLLADMAHISGLVAAKAVPSPFQYADMVTSTTHKSLRGARAGLIFYRKGVRSVD
KKGREIQYDLEDRVNFAVFPSLQGGPHNHAIAGVAVALKQAQTPMFREYIGQVMRNSKAM
AEALLSKGYTLVSGGTENHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALAP
GGLRLGAPALTSRQFKETDFVQVVEFMDEGFKIALDVKKKTGKLADFKNFLLEDPETVSR
MAELKNRVEAFARPFPMPGFEDH
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgttgacgttgaggcaaatcgcacggccattgtgcctgcgtgccccggtggcc
ctgagcagcgttggggcgaggaggagccagcatgcggctacccgtagtgtggaacaggag
gccccgtggactgggcaggacagtctggcccaggacgacccggagatgtggaacttgctg
cggaaagagaaggacaggcagtgtcgaggactggagctcattgcctctgagaacttctgc
agtcgggctgcgctggaggcccaaggatcctgcctcaataacaagtactcggagggctac
ccaggcaggaggtactacggtggagctgaggtggtcgaccagatagagttgttgtgccag
aagagagccctggaggcctttgacctggaccctgccctgtggggggtgaacgtccagccc
tactctggctctcccgccaacttcgctgcctacaccgccgtcctcaaccctcacgaccgc
atcatgggcctggacctgcctgacggtggacatctgacccatggttacatgtctgacacc
aagaggatatctgctacctccatctattttgagtccatgccctacaagctcaatcctgcc
acagggctcattgactatgaccagctggagatgactgcccgtctcttccggcccaagttg
atcattgcaggcaccagcgcctactctcgcctcattgactacgctcgcatcaagaagttg
tgtacggaggtgaaagcctacctgctggctgacatggcccacatcagtggtctggtggcc
gcgaaggctgtcccctcgccattccagtatgctgacatggtcacctccacaacacacaag
tccctccggggagccagggctggtctgatcttctaccgtaagggcgtgcgttctgtggac
aagaaggggagggagatccaatatgacctggaggaccgggtcaacttcgctgtgttcccc
tctcttcaggggggaccccacaaccacgccatcgccggggtggctgtcgctctcaaacag
gcccagacgccgatgttcagagagtacattggccaggtgatgcgtaactccaaggccatg
gctgaggccctactgagcaaaggatacacgctggtgtcaggggggacggagaaccacctg
gtgctggtggacctgaggcctaagggcattgatggagccagagcagagagagttttggag
ctggtgtccatcacagccaacaagaacacctgtcccggggacaagagtgccctggcgcct
gggggcctccggctaggtgccccggcgctgacctccagacagttcaaggagacagacttt
gtccaggtggtggagttcatggatgaaggctttaagatcgccctggacgtcaagaagaag
actgggaaacttgcagactttaagaacttcttgttggaggatccagagacggtctctcgc
atggcagagctgaagaaccgagtggaggcctttgcacgtcccttccccatgcccggcttc
gaggatcactag
DBGET
integrated database retrieval system
