Oncorhynchus masou masou (cherry salmon): 135540387
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Entry
135540387 CDS
T10723
Name
(RefSeq) zinc finger protein GLI1-like
KO
K16797
zinc finger protein GLI1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04340
Hedgehog signaling pathway
Brite
Transcription factors [BR:
omm03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
135540387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
zf-C2H2_4
FOXP-CC
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
135540387
NCBI-ProteinID:
XP_064823076
LinkDB
All DBs
Position
5:83036150..83191097
Genome browser
AA seq
1540 aa
AA seq
DB search
MPVDMQPHQRLYHYESTPNQPPRGHTPSGRSPYSDVSSLRAPLHNGQPLDCRNMYNPMTP
NPMTPNPRTNPNSGVNPMDQYMRPPLAPPLHSMMGHRGMNLFSDGGNSSPYCQNNLMSSH
YGFPHGHGSDHMGGGSRFSTPRSMLKLSKKRALSISPLSDASMDLHTVIRTSPNSLVAFV
NSRCGPNGGSSYGHLSVGAMSLSMGLSNSMNYQSRQQGSMYGGHTPGPCHAPPTRIPPHN
PRLHPPKHRHLKTEPGLGNVMDGINITCLEERSEGDMASPSSTGTQDPLLGLLDCREDLD
REEKPEPEVIYETNCHWESCSKEFDTQEQLVHHINNEHIHGEKKEFVCHWQECSREQRPF
KAQYMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAF
SNASDRAKHQNRTHSNEKPYVCKISGCTKRYTDPSSLRKHVKTVHGPEAHITKKHRGDTG
PRQPGLSLTPGGQRGELLLEKEEAGHREDCKLMAPESTLKSQPSPGGQSSCSSERSPLGS
ANNNDSGVEMNLNAAGSLEDLTALEDGGAGGGCEAGCSGAGMGGMSAHALKRLENLKIEK
LKQVRRPTPPGCCGGGNKLLALTGGPGEMMGGMCSPSPLLSNRRVMELSNHELGGGSSGM
VCPISDRRGSGTSSMSSAYTVSRRSSMVSPYLSSRRSSEVSQLGGGGGGGGGGGGGAGFL
GSDQGGGDPLPPETSCRRGPCRGVGGAGGGLPEMSSLTPAQQYSLKAKYAAATDGPPPTP
LLSMEQGPGTARRRGGFLSEYQGQPLPAFLQYGGPRRQRANTGEYGTGVIYPHQAPGNVT
RRSSDPVRSTGNPHALPKVQRFNSLNNLAMMGRRNALQHCGSDANISRHMLSPRPPSITE
NVVMEAMAMDAHGGTVDARDHGMMLPPGERGFLGYQNHHMGGPSSQLSPSHDSLGCPEQG
YQRVTETSMQGGHYQGTTRGPGQGQMGQGGPIHSEGMSNTLLQQAEYSMSTCQLSPSEPH
YPRLGQGGPDGGAGPWEESNQVQTPHGALQTGMQYQGQGSIQGQVQTQGLYSSQQSLYTQ
GPDGGHQNLNIKPEQQQYHPALANPDACQKQHQHQQQQRPMPMGPMSPQSYPQPGQPGQG
MMRTINPSCNFHGGGMENQIQASMQQGQQQSGGLSVGSAGLGPGGQSQTPMMQVKEMMVR
NYVQSQQALLWGQEQDQRGIAAEGKPLPLSDSMDMTGQQQQHQHQPQQQHQQSLYPKPDS
SIPGYSTNQKLMIPLSHSRGGPSSGSSIPSNEVPMMSLPGGPGSCYSQEMGVPVVPRPPQ
GRKPLIRQNSLQSQPGGGYLGSPPHVSPVQSTSSPRRAVRLPPVQRSQTHREIFSPSNNS
NMYYSGQIHMQHPDMDKQQIQIQRITHPHQDPTQTGPCLNQHQGHLVTHMDHQRNKSAQL
GYLHDHGSPPISNALENVDLDNAQIDFTSIIDDPDPSSFSPVNPPLHGGSGGSSQTSSQP
QSPHRPPPPCPPVLPNMAVGDMTSMLTSLADENMYLNTLS
NT seq
4623 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggacatgcagccacatcagaggctgtatcattatgagtctacacccaaccag
ccgcccagaggtcatactccatcaggaaggtcaccctacagtgatgtgtcatcgctccgt
gctccactccacaacggccagcctctggactgcaggaacatgtacaaccctatgacccct
aaccccatgacccctaatcccaggaccaaccctaactctggggtcaaccccatggaccag
tacatgcggccccctctggcccccccactgcacagcatgatgggacaccgtggcatgaat
ctgttctccgatggtggaaacagctccccctactgtcagaacaacctcatgtcatcccac
tatggcttcccccacggccacggatcagaccacatgggaggcggttcgcggttctccacg
cctcgctccatgctgaagctgagtaagaagcgtgctctgtccatctctcctctgtcggac
gccagcatggacctccacacggtcatcaggacctctcctaactcactggtggccttcgtc
aactcacgatgtggaccaaatggaggctcctcctatggacatctgtctgttggtgccatg
agtctgtctatgggtctctccaactccatgaactaccagtccagacaacaaggctcaatg
tacggtggacacaccccgggaccctgccacgcccctcccaccagaatacccccacacaac
ccccgactccacccacccaaacatagacacctgaagacagaacccggactgggcaatgtg
atggatgggataaacattacgtgtctggaggagagatccgagggagacatggccagccct
tcttccactggcacacaggatcctctgctgggtctgctggactgccgggaggatctggat
agggaggagaaaccggagccagaggtcatctatgaaaccaactgccactgggagagctgc
agcaaggagtttgacacgcaggagcagctagtgcaccacatcaacaatgagcacatccac
ggagagaagaaggagtttgtgtgccactggcaggagtgttccagggagcagagaccattc
aaagcccagtacatgctggtggttcacatgcgtaggcacacaggagagaaaccacataag
tgtacttttgagggctgtaataaggcctactctcgcctggagaacctgaagacccacctg
aggtctcatacgggggagaaaccatacgtctgtgaacacgagggctgcaacaaagccttc
tccaacgcctcagacagagccaagcaccagaaccgtacacactccaacgagaagccttac
gtgtgtaagatctctgggtgtactaagcgctacacagaccccagctctctgcggaagcac
gtgaagactgtccacggccctgaggctcacatcaccaagaagcatagaggagacactggg
cctcggcagccaggcttatcactgacacctggtggacagcgtggtgaactgctgctggag
aaagaagaggctggacacagggaggactgcaaactgatggcacctgagagcactctgaag
tctcagcccagcccgggtggccagtcttcctgcagtagcgagcgctctccactggggagc
gccaacaacaacgacagcggtgtggagatgaacctgaatgcagctggcagtctggaggac
ctgaccgctctggaggacggaggggcaggaggaggctgcgaggcggggtgctcaggggca
gggatggggggcatgtcagcacatgccctgaagagactagagaacctgaagatagagaag
ctgaaacaggtcagaagaccaactccgcccggatgctgtggtggggggaacaagctgctt
gcactcacaggtggtccaggcgagatgatgggagggatgtgttctccctcgcccctcctc
tccaaccgccgagtcatggaactgtccaatcacgagctggggggtggatcctctggcatg
gtctgtcctatcagtgaccggagggggagtggcaccagcagcatgagctcggcctacaca
gtgagccgtcgttcctccatggtttcgccctacctctccagccgacgctccagcgaggtc
tcccagctaggaggagggggaggtgggggaggaggaggaggaggaggagcaggattcctg
ggttctgaccagggaggaggtgaccccctcccccctgagacaagctgcagaagaggaccc
tgccgtggtgtaggaggggcaggaggagggttaccagagatgtctagtctaacgccagcc
cagcagtacagcctgaaggctaagtacgcagcagctactgacggcccaccccccacccca
ctacttagtatggagcagggcccgggaacagccaggaggagaggaggcttcctcagcgag
taccagggtcagccgctgccagcgttcctgcagtatggcggtcccaggagacaacgggcc
aacacgggagagtatggcactggggtcatctacccccaccaagccccagggaatgtcact
cggcgctccagtgaccccgtccgctccactggcaacccccatgcccttcccaaggtgcaa
cgcttcaatagcctgaacaacctggccatgatgggccggaggaacgccctgcagcattgt
gggtcagacgccaacatcagccgccatatgttatccccgcggccacccagcatcacagag
aacgtcgtgatggaggccatggccatggacgcccatggtggaaccgtggatgccagggac
catggcatgatgcttcccccaggagagagaggcttcctgggctaccagaaccaccacatg
gggggtccctccagccagctatcacccagccacgacagcctgggctgcccggagcagggc
tatcagcgagtgacagagacgtccatgcagggtgggcactaccagggtactaccagggga
ccaggacagggccagatggggcaagggggacccatccactcagaggggatgtccaacacc
ttgttacagcaggctgagtacagcatgagtacctgccagctcagcccctctgaaccacac
tacccccgcctgggccagggagggcccgatggaggtgcagggccctgggaggagagcaat
caggtccagacccctcatggagctctccagacagggatgcagtaccagggccagggctct
atacagggccaagtgcagacacagggtctctacagcagccagcagagtctgtacacccaa
ggcccagatggaggccaccagaatctgaacatcaaaccagagcagcagcagtatcatcca
gcccttgccaacccagacgcctgccaaaagcagcaccaacaccaacaacagcagaggccc
atgcccatgggacccatgtcccctcagagttacccccagccggggcaacctggccaaggc
atgatgaggactattaacccctcctgtaacttccatggtggagggatggagaaccagatc
caggcctccatgcagcagggacagcagcaaagcgggggcctcagcgtggggtcggctggt
ctggggcctgggggccagtctcagacaccaatgatgcaggtgaaggagatgatggtgagg
aactatgtgcagtcgcagcaggcactgctgtggggtcaggagcaggaccagagggggata
gcagcagagggaaaaccccttcctctgtcagacagcatggacatgacaggacaacagcaa
caacaccaacaccagccccagcaacaacaccaacaaagcctctaccccaagccagactcc
agcatcccaggctattccaccaaccagaaactgatgatccctctaagccatagccgagga
ggccccagctccggctcctccatcccctctaacgaggtccccatgatgagcctgcctgga
gggccagggtcctgctacagccaggaaatgggagtccctgtggtccctagaccaccccag
ggccggaagcctctcatcaggcagaatagcctccagtcccagccaggaggagggtacctg
ggcagtcctccacatgtcagcccagtccagtctacctccagcccaaggagagcagtccga
ctgccccctgtccagcgctctcagacccatcgggagatcttctctccctccaacaatagc
aacatgtattactcgggccagatccacatgcagcaccctgacatggacaagcagcagatc
caaatccagcggatcacccatcctcaccaggacccaacccagaccgggccctgcctcaac
cagcaccaggggcacctggtgacccatatggaccatcagcggaacaagtctgcccagctg
ggctacctccatgaccatgggtccccccccatctccaatgctctggagaacgtggatctg
gataatgcccagatagactttacctccatcattgatgacccagacccctcgtccttcagc
cccgtcaatccacctctccatgggggttctgggggttcatcccagacctcgtctcagcct
caatcaccccacagacctccaccaccctgccctcctgtgctccccaacatggctgtaggg
gacatgacctccatgctcacctctctggctgatgagaacatgtacctgaatacgttgtct
tag
DBGET
integrated database retrieval system
