Oncorhynchus masou masou (cherry salmon): 135540893
Help
Entry
135540893 CDS
T10723
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135540893 (gapvd1)
Membrane trafficking [BR:
omm04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
135540893 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
135540893
NCBI-ProteinID:
XP_064823192
LinkDB
All DBs
Position
1:complement(27740379..27771592)
Genome browser
AA seq
1467 aa
AA seq
DB search
MKPDIHTLAHHLKQERLYVASEKQLIQRLNGDVLKTAERLYRAAWITKQQRINLDRLILT
SAEASPAECCQHAKVLEDTQFLDGYKTLGFQESIYGEFLGRVRENPRLVASCLVAGERLN
QEHTQGVIYTVFTSLYGNCIMQEDENYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSIL
FKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPSKVTERFTPAQQERLFGEKGSE
GYRQKVAAAVEANEAKLVTLVNKFIGYLKQNTYCFPHNLRWIVSQMYKTLSCVERLEVGE
VRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADGDGDPR
RKNSLAKFDKSCVSAFLDVVIGGRAVETPPMSSMNLLEGLSRTVAYMTHSQLLCLVDFVR
SVMAGDYLREEEHILLETLMANVPQSRTVKSNSLELTPSNTPQLSPTTTPANKKNRNLGQ
QLATSWDSTTTTLSAHIPLVTPFASRSRSRTELAQQGEAEASSMESLQEVMPEEVLVISL
GSSPQTIPGMMSENEVLTVQQTDGAQGYTPADDTKHHCKPDKTLRFSLCSDNLEGISEGP
SNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEHATTQDNLDDKLRKFEIRDMM
GLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGAAVENMLGSLLCLPGSGSVLL
DPYGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGVGSTSDDTEVREVSSRP
STPGLSVVSATSEDIPNKTEDLRSECSSDFGGKDSVTSPDGEESSHGAHHSLASPPSQAD
SLLAMFDPLSSGEDSSTGTIVRPKVHYARPLHPPPDPPIPETCALGQEPRYSLFTPHCLA
QAELEHTKQRHSYTDRLVRSRSSDIVCPGRRPTSDPGLNRRAAAEERDHAGAFFMGPFSS
PSKDSLKGEVEERKDSDEEKSDRNRPWWKKRFQSAIPKAPIAALRKRDKQEKDNMGHERV
PQDDPLSRNSQAQAAEDILDKYRNIKRTSPSEGATAAAYDATELCGEECVHNSPRDEALQ
NMSTDDLPDSASQTAQQHDSNKFSFSDAKKKLRLALCSAESVAFPLMAPATTRNGLPDHT
DFEDNEIVCFLKVQLAEAINLQDKNQMAQIQETTRCVSRFDARTCKKLLAAIAEDYRKRA
PYIAYLTRCRQGLQTSHSHLERLLQRVLRDKEVANRYFTTVCVRLLLEHMEAKSLDFIKA
FQGCTASDDKTAAVEDFLRYLYGAMAHDAIWQYASEDQLQDAQMAIERSVMNRIFKLAFY
PNQDGDILRDQLLQEHIARLSKVVTANHKALQIPEVYAREAPWPSAQSEIRTISAYKTPR
DKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTIQYINNFYAS
RLSGEECYWWMQFTAAVEFIKTIDDRK
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagacatccacactctggcccatcacctgaagcaggagcggctgtacgtggcc
tcagagaaacaactgatccagcggctcaatggggacgtgctgaagactgcggagaggctg
taccgtgcggcctggatcaccaagcagcagaggatcaacctcgaccggcttatcctcacc
agtgctgaggcttccccggccgaatgctgccagcatgccaaagtgctggaggacacacag
ttcctggatggttacaagactctgggcttccaggagagcatctatggggagttcctgggc
cgcgtgcgggagaatccccggctggtggcctcctgcctggtggctggggagaggctgaac
caggagcacacacagggggtcatttacactgtcttcacctcactctatggcaactgtatc
atgcaggaggatgagaactacctgttgcaggtcctgcgatacttggtggagtttgagctg
aaggagagcgacaaccctcggcggctgctgcggcgaggaacgtgtgccttcagcatcctc
ttcaagctcttctctgaggggctgtactccgccaagctcttcctcaccgccaccctccat
gagcccatcatgcagctgctggtggaggatgaggaccacctggagacggacccctccaag
gtgacagagcgcttcacgccggcgcagcaggagcgcctgtttggggagaagggctcggag
ggctacaggcagaaggtggcggctgctgtggaggccaatgaggccaagctggtgaccctg
gtcaacaagttcatcggctacctgaagcagaacacctactgcttcccccacaacctgcgc
tggattgtgtctcagatgtacaagactctgtcgtgtgtggagaggctggaggtgggcgag
gtgcggaccatgtgcacggacctgctgctcacctgcttcatctgcccagccatagtcaac
cctgagcagtacggcatcatctcagacgccccgatcaacgaggtggctcgcttcaacctc
atgcaggtagggcagcttcttcaacagttggcaatggctgacggtgatggagaccccagg
aggaaaaacagtttggccaagttcgataagagctgcgtatctgccttcctggatgtggta
atcggagggagagctgtggagacgccgcccatgtcctccatgaacctacttgaaggcctc
agcaggactgtggcgtacatgacacacagtcagctgctctgcctggtggactttgtacgg
agtgtgatggcaggggactacctccgggaggaggagcacatactcctggagaccctaatg
gccaacgtgccccagtcccgcacagtgaagagcaacagtctggagctcaccccctccaac
accccccagctttccccaaccaccacccctgccaacaagaagaacaggaacttaggacaa
cagttagcaacgtcctgggattccacaaccaccaccctgtctgcacacattccattagtt
accccttttgcctcccgcagtcgcagccgtactgagctggcccagcagggggaagcagag
gccagctccatggaatccctgcaggaggtgatgccagaagaggtgctggtgatctcactc
ggaagcagcccgcagaccatccccggcatgatgtcagagaatgaggtgttgaccgtgcag
cagactgatggagcacaagggtacactcctgcagacgacaccaagcaccattgcaaacca
gacaaaaccctgcgtttctccctctgtagtgacaacctggagggtatctcagagggtccg
tccaaccggtctaactctgtgtcgtctctggacctggagggagagtctgtgtcagagctg
ggagctgggccatcagggagcaatggggtggaggctctacaactgctggagcatgaacat
gccaccactcaggacaacctggatgacaaactgaggaagtttgagatacgagacatgatg
ggcctgacggatgaccgggatatctctgagactgtgagtgagacctggagcacagacgtg
ctgggcagcgactttgaccccaacatggacgaagatagactgcaggaaatagctggggcg
gctgtagagaacatgctgggcagcctgctgtgtctaccaggctctggttcagtgctgcta
gacccatatggatccaccatctccgagaccaccagcgaggcctggagtgtggaggtcctg
cccagcgactcagaagccccagacctgaagcaggaggagcgtttacaggagctagagagc
tgctccggggtgggcagcacctccgatgacacagaggtcagagaggtcagctctcggccc
agcaccccagggctcagcgtcgtctcagcgacatcagaagacatccccaacaagacagag
gacctgcggtcagagtgcagctcggactttggggggaaggactctgtgaccagtccagat
ggggaggagtcatcccacggagcacatcacagtttggcctctcctccctctcaggctgac
tccttactggccatgtttgatcccctctcttccggcgaagattcctccactggtaccatc
gtgaggcccaaggtgcactacgccagaccccttcatcctccgcctgaccctcccatccca
gagacctgtgccctgggccaggagccccgctactccctgttcacgccccactgcctggcc
caagccgagctggagcacaccaagcagcgccactcctacacagacaggctggtacgcagc
cgcagctctgacattgtgtgcccaggccgccgacccaccagcgacccgggcctgaaccgc
agggctgcagccgaggagcgggaccatgccggggccttctttatggggccgttctcgtct
cctagcaaggactccctgaaaggggaggttgaggagagaaaggacagtgatgaggaaaag
tctgatcgcaacagaccgtggtggaagaaacgctttcagtcagccattcccaaagctccg
atagcagccttacggaaaagggacaagcaggagaaagacaatatgggccatgaacgtgtc
ccacaagacgaccctctgtccaggaactcccaggcccaggcagcagaagacatccttgac
aagtacaggaacatcaagaggaccagtcccagtgaaggagccactgctgcagcctacgac
gccacagagttgtgtggagaggagtgtgtgcacaactcccccagagacgaagctctgcag
aacatgtccacagacgacctgccagactcagccagccagacagcccagcaacacgattcc
aacaagttctcattcagtgatgcaaagaagaagttgaggctggccttgtgttcagcagag
tctgtggccttccctctcatggctcctgccaccacacgcaatgggctgcctgaccacaca
gactttgaagacaacgagatcgtgtgcttcctgaaggtccagctggcggaggccatcaac
ctgcaggataagaaccagatggcccagatccaggagaccacgcgctgcgtcagccgcttc
gacgcacgcacctgcaagaagctgctggctgccattgctgaggattacaggaagcgggca
ccctacatagcgtatctgacgcggtgtcggcagggtctgcagacatcccattcccacctg
gagaggctgctgcagagggtgctgagggacaaggaggtagctaaccgctacttcaccaca
gtctgtgttcgcctcctactggaacacatggaggcgaagtccctggacttcatcaaagcc
ttccaggggtgcacagcgtcagacgacaagacggcggcggtggaggacttcctgcgctac
ctgtacggggccatggcccatgatgccatctggcagtacgccagcgaggatcagctgcag
gatgcccagatggccatcgagcgcagcgtcatgaaccgcatcttcaagctggccttctac
cccaaccaggacggtgacatcctaagagaccagcttcttcaggaacacatagcacgtctc
tcaaaagtggtgacagcgaatcacaaagctcttcaaatcccagaggtgtatgcgagggag
gctccctggccgtctgcccagtcagagatccggaccatcagtgcctacaagacccctcgg
gacaaagtgcaatgtattttacgcatgtgttccaccatcatgaatctcctgagtctggcc
aacgaggactctgtccccggagctgacgattttgtccctgtgctcgtctttgtcctgata
aaggcaaacccgccttgcctgctgtccactattcagtacatcaataatttctacgccagc
cggctgagtggggaggagtgctattggtggatgcagttcaccgcggcagtggaattcatt
aagaccatcgacgatcgcaagtga
DBGET
integrated database retrieval system
