KEGG   Oncorhynchus masou masou (cherry salmon): 135541062
Entry
135541062         CDS       T10723                                 
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Pathway
omm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:omm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135541062
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omm03019]
    135541062
   03041 Spliceosome [BR:omm03041]
    135541062
Messenger RNA biogenesis [BR:omm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     135541062
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     135541062
Spliceosome [BR:omm03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    135541062
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 SET1_RBD Nup35_RRM_2 RRM_3 DNA_ligase_IV Gp6_C-I PHM7_cyt
Other DBs
NCBI-GeneID: 135541062
NCBI-ProteinID: XP_064823265
LinkDB
Position
6:complement(29309297..29312674)
AA seq 194 aa
MKNQLRKLFIGGLSFETTDESLRNYFERWGSLSDCVVMKDPVTKRSMGFGFVTYSSVEEV
DSSMEARPHKVDGRQVEPKRAVSREDSSRPGAHTMVKKIFVGGIKEDTEEQHLRDYFNQF
GKIEVIDIMTDXKKRGFAFVTFDDHDSVDRIVIQKYHTVNDHNCEVRKALSKEEINRSGP
RVGHFGRGYGYGGI
NT seq 585 nt   +upstreamnt  +downstreamnt
atgaaaaatcagctccgcaagctcttcattggtgggctgagtttcgagaccaccgacgag
agtttgcggaactattttgaacgatggggatccctctcagattgtgtggtgatgaaagat
ccagtcacaaagagatcaatgggctttggctttgtcacatacagctcagtggaggaagtt
gattcatcaatggaggctcgtcctcacaaggttgacggcagacaagtggagcccaagaga
gcggtgtccagagaggattcctctaggccaggtgctcacacaatggtgaagaagatcttt
gtgggtggaatcaaggaggacacagaggagcaacatctcagggactactttaatcaattt
ggcaagattgaagtcatcgacatcatgacagatnagaagaagaggggatttgcctttgtt
acatttgatgatcacgattcagtcgataggattgtcatccagaagtatcatacagtcaat
gatcacaactgtgaagtgaggaaggctttgtcaaaggaagaaattaaccgatcagggcca
agagttggacactttggcagaggttacggatatggaggtatataa

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