Oncorhynchus masou masou (cherry salmon): 135541249
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Entry
135541249 CDS
T10723
Symbol
itga7
Name
(RefSeq) integrin alpha-7
KO
K06583
integrin alpha 7
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04510
Focal adhesion
omm04512
ECM-receptor interaction
omm04810
Regulation of actin cytoskeleton
omm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135541249 (itga7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135541249 (itga7)
09142 Cell motility
04820 Cytoskeleton in muscle cells
135541249 (itga7)
04810 Regulation of actin cytoskeleton
135541249 (itga7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omm04147
]
135541249 (itga7)
04515 Cell adhesion molecules [BR:
omm04515
]
135541249 (itga7)
Exosome [BR:
omm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135541249 (itga7)
Cell adhesion molecules [BR:
omm04515
]
Integrins
Integrin alpha subunits
135541249 (itga7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_BP
Integrin_A_Ig_3
RT_RNaseH_2
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
135541249
NCBI-ProteinID:
XP_064823419
LinkDB
All DBs
Position
6:11613017..11691873
Genome browser
AA seq
1798 aa
AA seq
DB search
MAPHLRHGFSVSLSQRRCLLLHSLLLSIYFLTVAGFNLDTSMTLTKEGENGSFFGFSLAL
HQQLTPEPHSWILVGAPRARGLGLMQRKRPGALYRCPITGEEFDCERVDIDGDVNLDWES
KDNQWLGVTVKSQGIGGKVVTCAHLYELRQRVGLPSETRDPIGRCYVLSEDLTERDDLDG
GEWKFCEGRPQGHEQFGFCQQGLSAAFTPDNQFIMFGAPGTYNWKGEMRVQLLNQTLLDL
GFYDDGPYEVADEKQLNAQLIPVPYHSYLGLLFMASPDEDALVYKTLEPHSNRPMFEDVA
QNSYLGFSVDSAQGIMSRGELTFVAGAPRANHTGAVVLLRKDNMYRLVPQHILWGEELAS
SFGYSVATADLNSDGWTDLIVGAPNYFDRKAEIGGAVYIFLNPFGNWEYAQPIRLNGTYD
SMFGLTVNNVGDLDRDGYDDIAVGAPFDGDGKVFIYRGLSSGIDTKPAQILDGVDEGVKR
FGYSISGGLDIDGNLYPDLAVGSLGDKLVLYRSRPVIHVTRDVSIEPRQYIDLEQHNCKG
RDGVCVEVKACFTYTAYPETYSPDITLVLLIEADTERRKLGLPHRVSFLGRSAQATEYIH
TDEVELKGQRHPACQSATFQLNENIRDKLRPISLAITHTIRPPMFSSDTNQEERDTLPPV
LSVSTSNTLHSEVNFLREGCGDDKMPNLKERRNGTKEAILDPESRRKAVKQKVEAMLRMG
VIKESHSTWGSPIVTVPKPDGSLLSCNDFRGLNDISLFGDSHVPRLVQKDACDVGLGAVL
SLVQKDSCDVGLGAVLSQVQKDSCDVGLGAVLSQVQKDACDVGLGAVLSLVQKDACDVGL
GAVLSQVQKDACDVGLGAVLSQVQKDACDVGLGAVLSQVQKDACDVGLGAVLSQVQKDAC
DVGLGAVLSQVQKDACDVGLGAVLSQVQKDACDVGLGAVLSQVQKDACNVGLGAVLSQVQ
KDACDVGLGAVLTQVQKDSCNVGLGAVLSQVQKDACDVGLGAVLSQVQKDACDVGLGAVL
SQVQKDACDVGLGAVLSQVQKDACDVGLGAVLSQVQKDACDVGLGAVLSLVQKDACDVGL
GAVLSQVQKDACDVGLGAVLSQVQKDACDVGLGAVLSQVQKDACDVGLGAVLSQVQKDAC
DVGLGACPRCACDVGLGAVLSQVQKDACDVGLGAVLSQVQKDACDVGLGAVLSLVQKDAC
DVQKDACDVGLGAVLSQVQKDACDVGLGAVLSLVQKDACDVGLGAVLSQVQKDACDVGLG
AVLSLVQKDACDVGLGAVLSQVQKDACDVGLGAVLSLFSSKAWEQECPIEKGDIHRTDNR
PPPDRAKGNVWRTMDKPPGGDSSRPDQTPWDDEEVAVFSLSDQRSVVLEVTVTNMPSDPL
SPEEDGDDAHAAQLLVTLPDTLSYSGFRGQQVVCQANQNGSQAECELGNPLKRDAILKFY
IILSTSAITIETTELTVNLLLATISEQRDLATVTAVAKIIIELPLAVSVLARPHQLFFSG
AVKGESAMETLDDVGSAVEFEFTVTNTGPSLQTLGSAFLNIMWPHELSNGKWLLYPTALH
FHGHPETPCTPHTSLNPRKFSHSSPSDDQPQAAGLKARRKGRSNPEEEGHVMTKGSLGRT
TPAVAASERRKSLKLDCLLGSARCVLFQCPLHSFSESAVLKIQGRLWNSTFLEEFPSVSA
LELLVRANITVKSSIKHLVLRDAAAQVPVMIYPEVGLTAQYWIPWWWILIAILAGILVLS
LLVCILWKCGFFRRVQYEDKVPQYHAVKIPRQNRPQFQQEAGILQKKEWATHWSDGSS
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atggcaccacatctgagacatggattctcggtctctctttcacagcgccggtgtctcctc
ctccattctctccttctctccatctatttcctgactgttgcagggttcaacctggatact
agcatgactctgaccaaggagggggagaatggcagcttttttggattctctttagcgctt
caccagcaactcacaccagaaccacacagttggatcctggtgggggcgccgcgggccaga
ggactgggcctgatgcagaggaagcgccctggcgctctgtaccgctgtccaatcacaggc
gaggagtttgactgcgagcgtgtggacatcgatggagacgtaaacctagactgggaaagc
aaggacaaccagtggctcggagtaacagtcaagagccaggggattggaggaaaggtggtg
acgtgtgcccatctgtacgagctgcgtcagcgcgtgggcctgccgtcggagacacgggac
cccatcggccgctgctacgtactcagtgaggacctgaccgagagggatgacctagatgga
ggggagtggaagttctgtgaggggcgaccgcagggacacgaacagtttggcttctgtcag
cagggtctgtctgccgccttcacacccgacaaccaatttatcatgttcggagctcctgga
acgtacaactggaaaggagagatgcgcgtccagctactaaaccagactttactggatctg
ggtttctatgacgacgggccctatgaagtggcggatgagaaacagctgaatgctcagctg
atccctgttccctaccatagttacctggggctcttgttcatggctagtcccgatgaagat
gcgctggtgtacaaaactctggagccacactccaaccggcccatgtttgaggacgtagct
cagaatagctacttaggcttctcagtggactctgctcaaggcataatgagtcgtggtgag
ctgaccttcgtggcgggggctccgagagccaaccacacgggagcggtggtgctgttgcgt
aaagacaacatgtaccgcctggtgccacagcacatcctgtggggagaggagctggcgtct
tccttcgggtactctgtggccacggctgatctcaacagtgacggctggacagacctgata
gtgggagctcctaactactttgaccgaaaagcagagatcggaggtgctgtgtacatcttt
ctcaacccatttggtaactgggaatatgctcagccaatcaggctcaatggaacctatgac
tccatgtttggattgaccgtcaacaacgtgggagacttggacagggacggatatgacgac
atcgctgtgggggctccgttcgatggggatggcaaagtgttcatctaccgaggcttgtcc
tcaggcatcgacaccaagcctgcacagatcctggatggagtggacgagggggtgaagagg
ttcggctactccatctcaggaggtctggacatcgatgggaacctgtaccctgacctggca
gtaggctctctcggtgataagctagttctgtacaggtctcgcccggtcattcacgtgacc
cgggatgtatccatcgaacctaggcagtatattgacttggagcaacacaactgcaagggg
agagatggagtttgtgtggaggtcaaagcctgcttcacctatactgcttacccagagacc
tactcaccagacatcaccctggtcctactcatcgaggctgacacagagcgcaggaagctc
ggcctgccacaccgtgttagcttcctgggtcgcagtgcacaggcaacggagtacatacac
actgacgaggtggagctgaaaggtcaacgccatcccgcctgccagagcgccaccttccaa
ctaaacgagaatattcgtgataagctgcgtcccatctctctggccatcacccacaccatc
agaccccccatgttctcatctgacactaaccaagaggaacgagacacgctacctcctgta
ctgagtgtttccacctccaacaccctacactctgaggtgaatttcctgagggaaggctgt
ggcgatgataagatgcccaacctgaaggagaggagaaatggtacgaaagaggccatactg
gatccagaatctagaaggaaggccgtgaagcagaaggtggaggctatgctgaggatggga
gtcatcaaggagtcccacagcacatggggcagccccatcgtgacggtgcccaaaccggac
ggtagtctgctttcctgcaatgacttcagggggctaaacgacatcagtttgtttggggat
agtcatgtaccgaggctggtgcagaaggatgcctgcgatgtgggactaggggctgtcctg
tccctggtacagaaggattcctgcgatgtgggactaggggctgtcctgtcccaggtgcag
aaggattcctgcgatgtgggactaggggctgtcctgtcccaggtgcagaaggatgcctgc
gatgtgggactaggggctgtcctgtccctggtgcagaaggatgcctgcgatgtgggacta
ggggctgtcctgtcccaggtgcagaaggatgcctgcgatgtgggactaggggctgtcctg
tcccaggtgcagaaggatgcctgcgatgtgggactaggggctgtcctgtcccaggtgcag
aaggatgcctgcgatgtgggactaggggctgtcctgtcccaggtacagaaggatgcctgc
gatgtgggactaggggctgtcctgtcccaggtgcagaaggatgcctgcgatgtgggacta
ggggctgtcctgtcccaggtgcagaaggatgcctgcgatgtgggactaggggctgtcctg
tcccaggtgcagaaggatgcctgcaatgtgggactaggggctgtcctgtcccaggtgcag
aaggatgcctgcgatgtgggactaggggctgtcctgacccaggtgcagaaggattcctgc
aatgtgggactaggggctgtcctgtcccaggtgcagaaggatgcctgcgatgtgggacta
ggggctgtcctgtcccaggtgcagaaggatgcctgcgatgtgggactaggggctgtcctg
tcccaggtacagaaggatgcctgcgatgtgggactaggggctgtcctgtcccaggtgcag
aaggatgcctgcgatgtgggactaggggctgtcctgtcccaggtgcagaaggatgcctgc
gatgtgggactaggggctgtcctgtccctggtgcagaaggatgcctgcgatgtgggacta
ggggctgtcctgtcccaggtgcagaaggatgcctgcgatgtgggactaggggctgtcctg
tcccaggtgcagaaggatgcctgcgatgtgggactaggggctgtcctgtcccaggtgcag
aaggatgcctgcgatgtgggactaggggctgtcctgtcccaggtgcagaaggatgcctgc
gatgtgggactaggggcctgtcccaggtgtgcctgcgatgtgggactaggggctgtcctg
tcccaggtgcagaaggatgcctgcgatgtgggactaggggctgtcctgtcccaggtgcag
aaggatgcctgcgatgtgggactaggggctgtcctgtccctggtgcagaaggatgcctgc
gatgtgcagaaggatgcctgcgatgtgggactaggggctgtcctgtcccaggtgcagaag
gatgcctgcgatgtgggactaggggctgtcctgtccctggtgcagaaggatgcctgcgat
gtgggactaggggctgtcctgtcccaggtgcagaaggatgcctgcgatgtgggactaggg
gctgtcctgtccctggtgcagaaggatgcctgcgatgtgggactaggggctgtcctgtcc
caggtgcagaaggatgcctgcgatgtgggactaggggctgtcctgtccctgttcagcagc
aaagcatgggaacaggaatgccctatcgagaagggagacattcatcgcactgacaaccgc
ccccctcccgacagggctaaggggaatgtgtggcgtaccatggacaagccaccaggggga
gactcgtcgaggcctgatcaaaccccctgggatgatgaagaggtggcagtgttttctctg
tctgatcagaggtctgtggtgttggaggtgaccgtcaccaacatgccctcagaccctctg
tccccagaggaggatggagatgatgcccatgctgcccagctactggtgaccctgccagac
accctgtcctactctggcttcaggggacaacaggtggtgtgccaggccaatcagaacggg
tctcaggcggagtgcgagctgggaaaccccctgaagagagatgctatactgaaattctac
atcatcctcagcacgtctgctatcaccatagagaccacggaactcactgtcaacctcttg
ttggctaccatcagtgaacagcgagacctggccacagtcacggccgtggctaaaatcatc
atagagctccccctggctgtcagtgtgctggccagaccacaccagctgttcttcagtggg
gccgtaaagggggagagtgccatggagaccctggacgatgtggggagtgctgtggagttt
gagtttacggtgaccaacaccgggccgtccctgcagactctaggctccgccttcctcaac
atcatgtggcctcacgagctgtccaatgggaagtggctcctgtaccccactgctctccac
ttccatggccatccagaaacaccctgtaccccccacacctccctcaacccacgcaagttc
tcccacagttctccttctgacgaccagccacaggcagcaggcctgaaggccaggaggaag
gggcgttccaacccagaagaggagggccatgtgatgactaagggcagtctgggtaggact
acgcctgctgtggctgcctcagagagacgcaagtcactcaaactggactgtctgctgggt
tcagcgcgctgtgtgctgttccagtgtcctctccacagcttctctgagtcggctgtcctc
aagatccagggacgcctttggaacagcacctttctggaggagttcccatcagtcagtgct
ctggagctgctggttagagccaacatcacagtcaagtccagcatcaaacacctggtgctg
agggatgctgctgcacaggtcccagtgatgatttacccagaggttggtctgactgcccag
tactggatcccctggtggtggattctcatagccatcttggctggtatcttggtgctgtct
ctgctggtctgcatcctctggaagtgtggtttcttccgacgggtccagtatgaagacaaa
gttcctcagtaccatgcagtgaagatcccccgtcaaaaccggccccagttccagcaggag
gcagggatcctccagaagaaggagtgggccacacactggagtgatggaagctcctga
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