Oncorhynchus masou masou (cherry salmon): 135541253
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Entry
135541253 CDS
T10723
Symbol
pparg
Name
(RefSeq) peroxisome proliferator-activated receptor gamma isoform X1
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03320
PPAR signaling pathway
omm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
135541253 (pparg)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
135541253 (pparg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135541253 (pparg)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
omm03310
]
135541253 (pparg)
Transcription factors [BR:
omm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
135541253 (pparg)
Nuclear receptors [BR:
omm03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
135541253 (pparg)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
PPARgamma_N
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
135541253
NCBI-ProteinID:
XP_064823424
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All DBs
Position
6:54232..162691
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AA seq
607 aa
AA seq
DB search
MTPSLVRAHTVSETDTKSDMVDTQLLAWPMGISLTPVHLEELDDSSHSLDMKPFTTLDYT
SLDYEHGPTISSYRPTQVHHYQASHSPRPTQAHHYQASNSPRPTQAHHYHASYSPSHLSP
RPGQGYQPCPSPGSSPALGHHLAYMDHMYNHSQVQEGHGETCCIKLEPESPPQHSDSSPL
YSKLQDDTTASLLNIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLVYDHCDLHCRI
HKKSRNKCQYCRFQKCLVVGMSHNAIRFGRMPQAEKEKLLAEFSTDMDIMHPEAADLRSL
AKLLLESYLKYFPLTKAKARAILSGKTGDNAPFVIHDMKSLQEGERFINCRQMPIHVVQE
TRTEARTEAGTGAGCGLGGCLAVSEGLAVGEGLGGGVGLVQEPTDEVQLRFFYSCQSRSA
EAVREVTEFAKSIPGFVGLDLNDQVTLLKYGVIEVLIIMWAPLMNKDGTLISYGQIFMTR
EFLKSLRKPFCDMMEPKFEFSVKFNTLELYDSDMALFLAVIILSGDRPGLLNVKPIEELQ
ETVLHSLELQLKLNHPDSLQLFAKVLQKMTDLRQIVTDHVHLIQLLKKTEVDMCLHPLLQ
EIMRDLY
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgacaccaagtctggtccgagcacacactgtctccgagactgacaccaagtctgacatg
gtggatacccagctcctcgcatggccaatgggcatcagtctgacccctgtacacctggag
gagcttgatgacagttctcactctctggatatgaaaccattcaccaccctggactacact
agcctggactacgaacacggacccaccatctccagctacagacccacccaggtccaccac
taccaagcaagccacagtcccagacccacccaggcccaccactaccaagccagcaacagt
cccagacccacccaggcccaccactaccacgccagctacagccccagtcacctcagccct
agacctggccagggttaccagccctgccccagccctggctccagccctgccctgggacac
caccttgcatacatggaccacatgtacaaccacagccaggttcaggagggacacggtgag
acctgttgtataaaactggagccagagtctcctccccagcactcagacagcagtcctctc
tactccaagctacaggacgacaccaccgcttccctactcaacatagagtgtcgagtctgt
ggagacaaagcttctggcttccactacggagtccatgcctgtgaaggctgcaaggggttc
ttccgtcggaccatccggttgaagctggtttatgaccactgtgacctgcactgtcgcatc
cacaagaagagccgcaacaagtgtcagtactgtcgctttcagaagtgcctggtggtgggc
atgtctcacaatgccattcgttttggacggatgccccaggctgagaaggagaagctccta
gctgagttctctactgacatggacatcatgcaccctgaggctgccgacctgaggagcctg
gccaagctgctgctggagtcctatctcaaatacttccccctcactaaggccaaggccagg
gccatcctgtctggaaagactggggataacgcgccgtttgtaatccatgacatgaagtct
cttcaggaaggagagaggtttatcaactgcaggcagatgcccatccatgttgtccaggag
accaggactgaggcgaggactgaggctgggactggagctggctgtggtctaggtggatgt
ctggcagtgagtgaaggtctggctgtaggtgaaggtctaggaggaggtgttggtctggtc
caagagcccactgacgaggtgcagctcaggttcttctacagctgtcagtcacgctccgcc
gaggccgtccgggaggtcacagagttcgctaagagcatccctggcttcgtgggattggac
ctgaacgatcaggtgactctgctgaagtacggcgtcatcgaggtgctcatcatcatgtgg
gctccactcatgaacaaagatggtacactgatctcctatggacagatcttcatgacgaga
gagttcctaaagagcctgaggaaacccttctgtgatatgatggaacccaagtttgagttc
tctgttaagttcaacaccctggagctgtatgacagtgatatggcactcttcctcgccgtc
atcatcctcagtggagatcgtccaggcctgctgaatgtgaagcccattgaggagctacag
gaaacagtcctccactctctggagctccaactgaaactcaaccacccagactccctgcag
ctcttcgccaaggttctgcagaagatgacagacctgaggcagatagtaacagaccatgtg
cacctaatccagctactgaagaagactgaagtggacatgtgtctccacccactgctgcag
gagatcatgagagacctctactag
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