Oncorhynchus masou masou (cherry salmon): 135541286
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Entry
135541286 CDS
T10723
Symbol
nisch
Name
(RefSeq) nischarin isoform X1
KO
K24095
nischarin
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omm04990
]
135541286 (nisch)
Domain-containing proteins not elsewhere classified [BR:
omm04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
135541286 (nisch)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
PX
LRR_8
LRR_9
LRR_NXF1-5
LRR_14
LRR_6
Motif
Other DBs
NCBI-GeneID:
135541286
NCBI-ProteinID:
XP_064823482
LinkDB
All DBs
Position
6:complement(3920614..3980583)
Genome browser
AA seq
1625 aa
AA seq
DB search
MDTAVFPEDVVVKKVSIVGSELVENYTVYVIEVKVRDHRWTIKHRYSDFHDLHEKLTAEK
KIEKHLLPPKKMIGKNSKSLVEKRQKELEVYLQTLLVRFPTAAPKVLSYFLHFHQYEMNG
ITASLAEELFHKGEQLLVAGEVFTLCPLQLYAITQQLKLAKPTCSNGDAKADLGHILDFT
CRLKYLKITGTRGEVGTSNIQEDSLTFDLSVFKALRQIEISDCNSAQIMGLPSLKPCLVT
LNVHHSAASMMDVLVPEACVSPQWVAEGALTDRPVATIIPTWKTLTTLDMSHNHIGCIDN
SVKLIPKVEFLDLSSNELSMVENLQHLYNLIHLDLSYNILTVLEGAHTKLGNIKTLNLAG
NQLDSLAGLTKLYSLVNLDLSSNKLGQLEEIRYIGMLPCLERLVLSNNPMCIIPDYRTKV
LAQFWDRASEVCLDSTAPTEKELDTVEVLKAIQKAKESKDRMANNNEKKISEDSRLSGGG
PSISSSVAAASSSSSSLLSSALAPACSSQELICKEEGFVTPTILTPVDFIALDTQRCYDD
VNTLPCEEQLQVTSHQPDADSSSFERSSTQQNQNSSCCCYVQDREERYTWSNTNLRTPVL
PLHLPSTSSCPSFTSLLSARITRALGEENRRPSRLRDLPGQEETDLGSPSPSPSGDGYFE
MGLGEGKEREGEEEGSLTDPVEGENQAPETEVLHVTKVMWCHCIRVDDVVEQRSVCVVLT
NSLLGLFHCPRYASTAPTHQPQSQPHDLGSVTFQTQDVTLETLVDNLEPDLVLPYDQLDS
LLFYIPDTCLSLRVRSSDVHWYLFSDPKGLKETHSLLCSLAQLPSSPSGGPSTPQQLLHL
LFTSWEMEENQSCVKGGYAAHLVETAMLSSQTSQRTTSSTNPTLTPTKTSTNPDTFTLRT
LTNPLLSDILSHVVPGGDRDSSCCVPCVLFLTQRHLCVLKVDFKALARGTTVDEPSDDHN
QRLRSCSRLSRIPLASVLPHPRPSAQYGAGAGSIPAYSPSCPLTWHHRSPRDGRVMELLV
GQERVTAVFPLPHDRLRFQKQFTLLRSSLRDIKTVAFLQGGNEHSHSDGDSPRTINLYTS
TPNETKSTDRLQVNSPRGAQRPRPSLSLSYPTDILVEKLTGDNQVPSHLTLSPALSLVSG
LRGHQLLGFFHTNIAEEEKEELHHILWSSVVFYKSPDVEATSCIMLSTKALYFLLDDSAS
TLNDQSLLWDWSHCDHRDPELIMSYCFTIDLHDLHSVNVGLFDQYFRVVGPSADHIICCL
TRDSYGTHRFLQQLMTVLSLQDKLPSPEPSEQDFYTQFGNKSTGKMGNYELVHSSRVKFI
YPSEEEIGDLTFIVAERKGPSGASSCNILLYVLVFQVQTQGLGFSQTQGLGFSQTQGLGF
SQTQGLGFSQTQGLGFSQTQGLGFSQTQGLGFSQTQLQTDRLLLGVCRGDRESHLHPQSP
VSASQPRLHPYPQATGPATSTRPHIPQQSMPPQAPSTPRPVLHPKTLILTSTDVFLLDED
YISYPLPDFAKEPPPRDKYQLTDARRIRDLDRVLMGYQTYPQALTLVFDDVPGPDLLCQL
TMDHFGEEEVGGGGGEKGRRCGRTESEVLWCIYVPGADSRERLICLLARQWEVLCSRELP
VELTG
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atggatactgccgtatttcccgaggatgtcgttgtaaaaaaggtttccatcgttggatcg
gagctcgtagagaattacactgtgtacgtcattgaggtgaaagtaagggatcacagatgg
accataaagcatcgctacagtgatttccatgacttgcatgagaaactgacagctgagaag
aagatagagaaacatttacttccgcctaagaagatgatcggtaaaaactccaaaagcttg
gtagagaaacgtcagaaggaactggaagtctacctacaaacactgctggtcagattccct
acagctgcccctaaagtcctctcctactttctgcacttccaccaatatgaaatgaatgga
atcacagcctctctggcagaggagctgttccacaagggagagcagttgctggtggctggt
gaggtgttcacattgtgtcccctccagctgtatgccatcactcagcagctgaagctggcc
aagcctacctgctctaatggtgacgccaaggcagacctaggacacatcctggacttcacc
tgcagactcaaatacctcaagatcacaggcaccagaggagaggtggggaccagtaacatc
caggaagacagcctcacgtttgacctttcagtctttaaagctctccgacagatagagata
agtgactgtaactcggcccagatcatgggactgccttctctgaaaccctgtctggtcacg
ctgaatgtccaccactctgcagcatccatgatggatgtgctggttccggaggcatgcgtg
tcccctcagtgggtcgcagagggagcgcttacggaccggcccgtcgccaccatcatccct
acctggaagactctcaccaccctggacatgagccacaaccacataggctgcatagacaac
tcagtgaaattgataccaaaagtagaattcttagatcttagttccaacgagctctctatg
gtggaaaaccttcagcacctgtacaatctgatccacctggacctttcttacaacattctg
acagtgttagagggggcccacaccaaactgggtaacatcaagaccctcaacctggcaggc
aaccagctcgacagcctcgcaggcctcactaagctatactctctggttaacctggacctc
agctccaacaaactgggacagcttgaggagatcaggtacataggaatgctgccctgcctg
gagaggctggtcctgtctaacaaccccatgtgtatcatccctgactacagaaccaaggtg
ctggctcagttctgggaccgtgcctcagaggtatgcttggacagcactgctccgacagag
aaagagctggacactgtggaggtgttgaaagctattcagaaagccaaagaatctaaagac
cgaatggccaacaacaacgaaaagaagatcagtgaggactccaggctgtctggtggtgga
ccttccatctcctcctctgtcgctgccgcctcttcctcctcttcctctctcctctcctca
gccctagccccagcctgctccagccaagaattgatatgtaaagaagaaggctttgttacc
cctacaatattgactcctgtggattttattgcacttgatacccagcgatgctatgatgat
gtaaacacactgccttgtgaggaacaactgcaggttaccagccaccaacctgatgctgat
tctagttcttttgaacgctccagtacccaacagaaccagaacagtagctgctgctgctat
gtgcaggacagagaggagcgatacacatggagcaacactaacctgaggacccctgtgctc
cccctccacctcccctccacctcctcctgtccgtccttcacctctctgctgtctgcccgc
atcaccagagccctgggagaggagaacaggaggcccagcagactccgagatctccccggc
caggaagagactgatctgggcagccccagccccagcccctctggagatggatactttgag
atgggtctgggggagggaaaggagagggagggagaggaggaggggtccctgactgacccg
gtagagggagagaaccaggccccagagacagaggtgttacatgtgaccaaagtcatgtgg
tgccactgcatcagggttgatgatgtggtggagcagaggtcggtgtgtgtggtgctaaca
aatagtctactggggctgttccactgtcctcgttacgcctccacagccccaacccatcaa
ccccagagccagcctcacgaccttggctcagtcacatttcagacccaggacgtaaccctg
gaaactctagtagataacctggagccagacctcgtccttccctatgaccagctagactct
ctcctcttctacatcccagacacttgcctttccctgagggtgaggtcctctgatgtccac
tggtacctcttctcagaccccaagggtttaaaagagacccactccctgctctgctccctg
gcccagctcccctcctccccgtcaggaggaccctccaccccacagcagctcctccacctg
ctcttcacctcctgggagatggaagagaaccagagctgtgtgaaaggaggttatgcggca
catctagtggagactgccatgttgtcgtcccagaccagccagcggacaacctcctcaaca
aacccaactctcactccaacgaagacctctactaacccagataccttcaccctccgaact
ctaaccaatccccttctctctgacatcctatcccacgtagttccaggaggggacagagac
tcctcctgctgtgtcccctgtgtcttgttcttgacccagcgccatctctgtgtgctgaag
gtggacttcaaagctctggcccgaggaaccaccgtagatgaaccgtcagacgaccacaac
cagaggctccgctcctgctccaggctcagccgcatccccctggcctccgtgctgccccac
ccaaggccgagtgcccagtatggggctggtgctgggtctatccctgcctactctcccagc
tgccctttgacctggcaccaccgctcccccagagacggccgtgtcatggagctcctagtg
ggacaggagagggtcacggcggtgttcccgttgcctcacgacaggctccgtttccagaaa
cagttcaccctgctgcgctccagcctcagggacatcaagactgtggctttcctgcagggt
gggaacgaacatagccacagtgacggggacagtcccaggacgataaatctctacacgtcc
actcccaatgagaccaagagcacggacagactgcaggttaacagccctcgaggtgctcag
cgtcctcggccatccctgtccctgtcctacccaacagacatcctggtggagaagctgacc
ggagacaatcaggtcccatcccacctgaccctgtccccagccctgtccctcgtctctggg
cttaggggacaccagctgctggggttcttccacacaaacattgcagaggaagagaaggaa
gagctgcatcacatcctgtggtcatcggtggttttttataagtcacctgacgtcgaggcc
acttcctgtatcatgctctctaccaaagccctctacttcctgctggatgactccgcctcc
actctcaatgaccaatcactactgtgggactggagccactgtgaccatcgggacccagag
ctgatcatgtcttactgtttcaccatcgacctccacgacctccactctgtcaacgtgggc
ctgtttgaccagtacttcagggtggtggggccgtcagcggaccacatcatctgctgtctg
acgagggacagttacgggacacaccgcttcctgcagcagctgatgacggtcctctctcta
caggacaaactaccctctcctgaaccctccgaacaagacttctacacacagtttggaaat
aaatctacaggtaagatggggaactatgaactggtccactctagcagggtaaagttcatc
tacccgagcgaagaagagattggagacctgacctttatcgtagccgagaggaaaggtcct
tctggggcatccagctgtaatatcctgctctacgtactggtcttccaggtgcagacccag
gggctaggtttctcccagacccaggggctaggtttctcccagacccaggggctaggtttc
tcccagacccaggggctaggtttctcccagacccaggggctaggtttctcccagacccag
gggctaggtttctcccagacccaggggctaggtttctcccagacccagctgcagacagac
agacttctactgggggtctgcaggggggatagagagtctcacctccacccccagagcccg
gtctctgctagccaaccccgtcttcacccctacccccaggctacaggcccagccacctcc
accaggccccatatcccccaacagagcatgcctccccaggctccctccacccccaggcct
gtcctccatcctaagactctgatcctaaccagcacagacgtcttcctgttggatgaggat
tatatcagctacccgctgccggactttgccaaggagccccctccccgagacaagtaccaa
ctgaccgatgctcgacgaataagagacctggatagagtcctcatgggttaccagacgtac
ccacaggcgctgacgttagtctttgacgatgtccctgggccagacctcctctgtcagctt
accatggaccactttggagaagaggaggtgggaggaggaggaggggagaaggggaggaga
tgtggcagaacagagagcgaggtactgtggtgtatctatgtccccggagcagacagcagg
gagaggctgatatgtctgttagcaagacagtgggaagtgctgtgtagtagggagctacct
gtagaactcactggctga
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integrated database retrieval system
