Oncorhynchus masou masou (cherry salmon): 135541418
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Entry
135541418 CDS
T10723
Name
(RefSeq) integrin alpha-5-like
KO
K06484
integrin alpha 5
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03266
Virion - Herpesvirus
omm04145
Phagosome
omm04510
Focal adhesion
omm04512
ECM-receptor interaction
omm04810
Regulation of actin cytoskeleton
omm04820
Cytoskeleton in muscle cells
omm05100
Bacterial invasion of epithelial cells
omm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
135541418
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135541418
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
135541418
09144 Cellular community - eukaryotes
04510 Focal adhesion
135541418
09142 Cell motility
04820 Cytoskeleton in muscle cells
135541418
04810 Regulation of actin cytoskeleton
135541418
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135541418
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
135541418
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omm04147
]
135541418
04515 Cell adhesion molecules [BR:
omm04515
]
135541418
04090 CD molecules [BR:
omm04090
]
135541418
Exosome [BR:
omm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135541418
Cell adhesion molecules [BR:
omm04515
]
Integrins
Integrin alpha subunits
135541418
CD molecules [BR:
omm04090
]
Proteins
135541418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
ITGAX-like_Ig_3
DUF11
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
135541418
NCBI-ProteinID:
XP_064823726
LinkDB
All DBs
Position
6:16263370..16339259
Genome browser
AA seq
1062 aa
AA seq
DB search
MGTGRRLSAISVNSILRNPGYCARFVVIAVVFIQLCATFNLETENRIVYSGPKGSFFGYS
VDFFYNNASSFSILIGAPKANTSQTNIIEGGSVYLCPWSQDQSDCSVVNFDNEGDRSFHV
NDVDVQVEFKSHQWFGATVRSHGNTVLACAPRYYWRTEHDAPFSDATGTCYLSVDNLKTF
VEYAPCRTERHGPAGQGYCQGGFSADFTKDGKVVLGGPGSFYWQGQLVSATTEEIVKAYF
PSYFLLSVTGQIQTRQVQGSYDDSYLGYSVAGGEFSGDDIEDFITGVPKGLMLHGLVSLL
NGTDLKSMLNLTGEQMGSYFGYAVAATDINNDGLDDLVVGAPMFMQRGSDGLRWEEVGRV
YVYLQQRPLLFEPSLPPLGGSQAFGRFGSSLAPLGDLNQDGFNDIAIGCPFGGDDQQGLV
LIYNGHASGLKDTPTQALAGQWASGTFPASFGYALRGEIDLDQNGYPDLIVGAFGADKAV
LYRARPIVNASASLTVQPTMINSEEKSCMVSLGNKTISVSCVNLSFCLSANGKHLAADLV
FMVEVQLDHLEQKQRESSVRRTLFLDSHQPSLLETITMANGGPTCHDTRIYLRSEGEFRD
KLSPIYITLNFSLDPLAQLDLHGLKPILNYQTTHIIKQKAQIQLDCGEDNICVPDLKLSV
YGDRTEVYLGDENSLTLTFNARNEGEGGAYEAELYVVLPTEADYSGIARNNASLTQLTCS
YEAENQTRSLVCDLGNPMKSGTSLWAGLRFTVPRLKDTHNTVQFELQIRSKNENKSQSDD
ELFQLEVAVVADVILQGVSRPDKLLFPPPNWRMSHSLQEEQDVGPEIQHVYELVNNGPSM
ISQSVLELRCPLKSQGHDLLYPLEVITQGPLDCSSNHTLNALKLKLQPPTTEQPPSPLTA
SPEHHVQRREVYRDPLDEQGNLSCSTAECWRLRCHVGLLERGSSVILTVRSRIWPEAFLE
RAYKQYVLECSVEYGVEKMPYSIAPKLKPSGSKKVLTPVMWNKPDSQYMVPLWIIILAIL
AGLLLLALVIYVLYKLGFFKRSNPYDTAMEKAQLKPHASSEA
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgggcactggacggcgactttcagcaatttcagtcaactcaatcctgcgaaatccaggt
tattgcgcccggttcgttgtaattgcagttgtttttatccagctgtgcgcaacgtttaac
ttagaaacagaaaaccggatcgtctactctggacccaagggatcttttttcggttattcc
gtggattttttctacaataatgcatctagtttcagtattctgattggtgctcccaaagct
aacaccagccaaacgaacatcatcgaaggtggatctgtgtacttgtgtccctggagccag
gaccaatcggattgcagtgttgtcaattttgacaatgaaggggatcgcagcttccacgtc
aacgacgtcgacgtccaggtcgagttcaagtcccatcagtggtttggggctacggtgcgt
tcccatggcaacactgtcctggcttgtgccccaagatattactggagaacggaacacgat
gcccccttctcggatgccacaggaacctgctacctctccgtggacaacctcaagacattt
gtggagtacgccccctgtcgcacagagagacatggtcctgcaggacagggctactgtcag
ggtgggttcagtgctgacttcaccaaggatgggaaggttgttctcggaggaccaggaagc
ttttactggcaaggtcaactagtctcagccaccacagaggaaatcgtcaaggcctacttc
ccatcctacttcctgctctctgttactgggcagatccagactcggcaggtgcaggggagc
tatgacgacagctacctcggttactctgttgccggtggggagttcagtggagatgatatt
gaagacttcatcaccggagtacccaaaggactcatgctgcatggtttagtgtcattactc
aatgggacagatctgaaatctatgctgaacctaactggagaacagatgggttcctatttc
ggctacgcagtggcagccaccgacatcaacaacgatggtctggatgacctggtggtgggt
gctcccatgttcatgcagagggggtctgacggactgcgttgggaagaggtgggccgtgtc
tatgtgtacctacagcagcgtcccttgttgtttgagcccagcctgccccccttgggaggt
agtcaggccttcgggaggttcggaagctccctggccccgctgggagacctcaatcaggac
ggcttcaacgatattgcaattggctgtccctttggaggagacgaccaacagggattggtc
ctcatctataacgggcatgccagtgggctgaaggacacgcccactcaggctctagctggc
caatgggcctctggcacctttcctgccagttttggctatgccctccgcggagagatagat
ctggaccagaatgggtacccagatctcatcgtaggtgcttttggggctgacaaggctgtt
ctgtacagagctcggcctattgtcaacgccagtgcttctcttactgtgcaacctaccatg
atcaactcagaggagaagagttgtatggtgtcccttgggaacaagactatctctgtgtct
tgtgtcaacctcagtttctgcctctcggccaatgggaagcacctcgctgctgatctagtt
tttatggtggaggtgcagttggaccatctggagcagaaacagagagagtcatcagtgagg
agaactctgttcctagatagccatcagcccagcctgctggagaccatcaccatggccaac
ggaggaccaacatgtcacgacacccgcatctacctgcgcagtgaaggggagtttcgggat
aaactgtcgcccatttacatcaccctcaactttagcctggatcctctcgctcaactggac
ctccatggcctaaaacccattctaaactaccagacaacacatattataaagcagaaggcc
caaattcagctggactgtggggaggacaacatctgtgttcctgacctcaaactgtccgtt
tatggcgataggacagaggtgtatctcggcgacgagaactccctgaccctgaccttcaat
gccaggaacgagggagagggcggggcctacgaggcagagctttacgtggtactgcccacg
gaggctgactacagtggtatagcccgcaacaatgcgagtctgactcagctgacctgtagc
tacgaggcagagaatcagacccgctctctggtctgtgacctgggcaaccctatgaagtct
ggaacaagtttgtgggcaggcctccgcttcactgtgcctcgactgaaggacactcacaat
acagtacagtttgagctccagatacgcagtaaaaatgagaataaatcccagagtgatgat
gagctctttcaactggaggtggctgtggttgctgatgttatcctacagggcgtttctcgt
ccggacaagctcctcttccctcccccgaactggaggatgagccacagcctacaagaggag
caggatgttgggcctgagatccagcatgtgtacgagttggtgaacaacgggcccagtatg
atcagtcagtcagtgctggagctgcgctgccctctgaaatctcagggtcacgaccttttg
taccctctggaggtcatcactcagggaccactcgactgcagctccaaccacaccctcaat
gcactgaagctcaagctccagcctcctacaacagagcagccaccctcaccactgacagcc
agccctgaacaccacgtccagaggagagaggtctacagggatcctctggatgaacaagga
aacctgtcgtgttctaccgctgagtgctggaggctgcgctgtcatgtcgggttactggag
agaggaagcagtgtcattctgaccgtccgctcacgcatctggcctgaggccttccttgag
agggcatacaagcagtatgttctggagtgttctgtggagtacggagtcgagaagatgccc
tattccatcgctcccaaactcaaacccagtggatccaagaaggtcctgactccagtgatg
tggaacaagccagacagccagtacatggtaccactgtggatcatcattctggccatactg
gctggattgctgctgctcgccctggtcatatatgtactctacaagttgggcttcttcaaa
cgatccaatccttatgatacggccatggagaaagctcaactcaaaccacatgcttcttct
gaggcctaa
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