Oncorhynchus masou masou (cherry salmon): 135541562
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Entry
135541562 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: F-box only protein 42-like
KO
K10317
F-box protein 42
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135541562
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
135541562
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_4
Kelch_1
Kelch_5
Kelch_2
Kelch_6
NANM
F-box-like
F-box
F-box_5
Motif
Other DBs
NCBI-GeneID:
135541562
NCBI-ProteinID:
XP_064823938
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All DBs
Position
6:complement(21287322..21308576)
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AA seq
722 aa
AA seq
DB search
MRRDNSQDRKPTKEYVQNYGTERMSRSSDSDDGYFVAMDTEEDVSGPVGMAQGEDLKLGT
SRGEGDVEGCNEVEGTMVELPEEVLEYILSFLSPYQEHKTAALVCKQWYRLIKGVAYQCY
HGFLRAVQEGNIQWESRTYPYPGTPITQRFSHSACYYDSNQSMYVFGGCTQSSCNAAFND
LWRLDLNSKEWIRPLASGSYPSPKAGATLVMYNNLLVLFGGWTRPSPYPLHQPERFFDEI
HTYSPSKNWWNCIVTTQGPLPMAGHSSSVIGSVMVVFGGSLGARQMSNEVWVLDLEQWSW
SKPTISGPSPHPRGGQSQIVIDNKTLLILGGCGGPNALLKDAWLLHMGAPPWTWQQLRVE
NDDHGAPELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISASPGPLGPEPPSLR
SQSPLRSGAAGVVLGAVEEAPCVNGRWGTLRPRPSARGGAREGSPGSSSQQPSPSQGPDS
PPLPSLHPLLNGSSPSPRTSPAQDASPPSRXPVSSDYGWESPPSATHPLSEVPSTNGVHT
PPPAPGSPRTPPGAVSPAALRRGLEAVKNLSSSSSSNPLSQGAASGGSGGGVASAGTSPS
SSPPQAAAAGSDGHSIPPIARRLGHHPPQSLNVGKPLYQSLNCKPMQMYVLDVSRAKAAG
LVSWRDYGNGTPAAVTGPPETSLHTVVQGRGELIIFGGLMDKKQNVKYYPKTNALYFVRA
KR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgagaagagataattcacaagatagaaaaccaactaaagaatacgtgcagaattacggc
acagaaagaatgtcccgctcttcagacagtgatgatgggtactttgttgccatggataca
gaggaagatgtatcagggcctgttggaatggcacagggggaagatctgaaattggggacc
agcagaggagagggggacgtagaaggctgcaatgaggttgaggggacaatggtggagctg
ccggaggaagtcctagaatacatcctgtccttcctctcaccataccaggagcacaagacc
gctgcactggtgtgtaaacagtggtatcgcctcattaaaggtgttgcatatcagtgttac
catggttttctgcgggccgtccaggagggcaatattcagtgggagagtcgtacataccca
tatcctggaacacccatcacgcaacgcttctcacacagtgcatgctactacgactccaac
cagtccatgtatgtgtttgggggctgtactcaaagtagctgcaacgctgccttcaatgac
ctgtggagacttgacctcaacagcaaggagtggatccgccctttagcctcgggctcctat
ccgtctcctaaagcgggtgctaccctggtgatgtacaacaatctgctggtgctgtttggt
ggatggactcgacctagcccatacccactacatcagcctgagaggttctttgacgagatc
cacacatactccccctccaaaaactggtggaactgcatcgtgacaacccaaggaccccta
cccatggccggtcactcctcctccgtcatagggagcgtcatggtggtgtttggagggtcg
ctaggggcccgccaaatgagtaacgaggtgtgggttctggatctggagcagtggtcctgg
tccaagcccaccatctccgggccgtccccacacccacgaggaggccagtctcagattgtg
attgacaacaagactcttcttattctgggaggctgtggaggccctaatgcactgctgaaa
gatgcctggctcctgcacatgggtgccccaccctggacatggcagcagctgagggtggag
aacgatgaccatggagccccagaactgtggtgccaccctgcttgcagggttggacagtgt
gtagtggtgttctcccaggctccgtctggccgtgcgccactcagccccagcctgaactct
cggccctcccccatcagtgcctctcctggccccctgggcccagagcccccctcgctgcgc
tcccagtccccattaaggagcggcgctgccggggtcgtcctgggggctgttgaggaggcc
ccctgtgtgaacggccgctgggggacactgagaccacgtccctcggccagagggggtgcc
agagagggtagccccggctcctcctctcaacagccatccccctcccaggggcctgacagc
ccgcctctgccctccctccatcctctactcaacggttcatccccctctccccggaccagc
cctgcccaggatgcctccccgccctctcgcncccctgtctcctcggactacggctgggag
tctcccccctcagccacccaccccctttccgaggtacccagcactaacggcgtgcacacg
cctccacctgcccctggctccccacgcactcccccgggggccgtgtcccccgcagccctg
agacgaggcctggaggctgtcaaaaacctgtcctcttcatcctcctcaaaccccttgtcc
caaggagctgcttcaggaggaagtgggggaggagtggcttcagcaggaacatccccctct
tccagcccgccacaggctgctgctgccgggtctgatggacactccatcccgcctatcgca
cggcggcttggccaccacccgccccagagcctgaacgtgggcaagcccctgtaccagtcg
ctcaattgcaagcccatgcagatgtatgtcctggacgtgtcccgagccaaagcagcaggt
ctcgtctcctggagggattacgggaacggcacccccgctgccgtcacaggcccccccgag
accagccttcacacagtggtccagggtaggggcgagctcatcatattcgggggcttgatg
gacaagaagcagaatgtgaagtactaccctaaaaccaacgccttgtactttgtgcgcgct
aagaggtaa
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