Oncorhynchus masou masou (cherry salmon): 135541720
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Entry
135541720 CDS
T10723
Name
(RefSeq) protein polybromo-1-like isoform X1
KO
K11757
protein polybromo-1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135541720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omm03021
]
135541720
03036 Chromosome and associated proteins [BR:
omm03036
]
135541720
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135541720
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
135541720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
135541720
NCBI-ProteinID:
XP_064824101
LinkDB
All DBs
Position
6:24586041..24601517
Genome browser
AA seq
1623 aa
AA seq
DB search
MQMSSKRRRATSPSSSVSGGDFDDASSTPGSGRKRRRAFNVPTVDPIAVCHELYNTVRDH
KDDQGRLLCELFIRVPKRRNLPDYYEVVSQPIDMTKIQQKLKSEDYQDVEQLTADFQLMF
KNAKNYYKAESEEYKAACRLWELYVHIRNEFVQPGDGDEDDDDGEDMLDNPALSTEDETP
PSCLKEVLEQLLDAVVSYTDTSGRVISELFQKLPSKMHYPDYYAVIKEPIDLRAIAQRIQ
IGYYKSVTAMAKDVDLLAKNAKTYNEPGSQVFKDANTIKKVFIQRKTEIDHAEPTKTSVR
IRNRRSAQGDRLSAITLALQYGSESDEDALLSGSVHYDEGESEAECLSFSMDMGNPVFQL
YEAVRGGRNSQGQLLSEPFLQVPSRKEYPDYYQQVKQPIALQQIREKMKNGEYQSVDQMD
SDLTLMFENAKRYNVPNSAIFKRALRLQQILLMKKRELLRRGDEEDQDSILSSDTGTGSA
TKKKSHKKNVKKNRMKALYAAVTEAREAGTNRRLCDLFMVKPSKKDYADYYKVILEPMDL
KTMEHNIRSERYATEEALMDDMRLMFRNARHYNEEGSQVYDDADILEKIVKDKRKELGAS
PEEGTDNMGSPKLKLRKSGASPKKSNKYLTPLQQRLNELYDAVRNYTDGRGRRISTIFLR
LPSRAELPDYYSTIKRPIDMERLRSHMAGGRYQDVDALVEDFALMFNNACTYNEPESLIY
RDALLLHRVLLETRRLQEGVEEGGSPPAVGPLVRELIRNLFMSVLGHQDEEGRCYSDSLA
EIPAQDPASPEKPLLNFDVIRANVERGRYRRLDVFQEHMFEVLEKARRLHRTDSEIFEDA
VELQQFFIKIRDELCKNGEILLSPALSYTSKHMHSDVEQEKREKLPKEMEEDKLKREEEN
KEEGEKAEDPAGGGAGPERMYSQDCSFENRTYHVGDCVYVQLAEANRKPHIVCIERLWED
EAGEKWLYGCWFYRPGETFHLATRKFLQQEVFKSDYFNKVLVSKILGKCMVMFVKDYFKL
QPEGVRPEDVYVCESRYSARNKAFKKIKLWAVPAAVRFVPRDVPLPVVRVASMYAKRDQE
KLLAVADNGSRSIVDKEREDVPVEMTGGEPGCPYYDQLHYNNMWLKVGDCVYIQSHELIK
PRIGRIEKLWVRDGAAFFFGPIFIHPEETEHEPTRMFYKREVFLSNLEETCPMTCVIGKC
VVSSFKDYLSCRPTEVSEEDVLLCESRYIESEKQMKKFKGLKRFSLHAKVVDDEIYYFRK
LIVPQKEPSPLLNKKIEELEMKLADTNEGDEDLDDLEDEDEAPETPSMPIMQTPLASDLD
IMPYTPPQSTPKVKGVSKKDGAKRKMNMSGYILFSSEMRSVIKTRHPDFSFGELSRLVGT
EWRNLEAPKKVEYEERAARVVEQQERERAAQQQASPRAGTPVGAMMGMTPGPGMMGAYGP
PYGMPMQGPYEGLLGMGPMGSMPPQHFQPGMPGYHPGMPHPGMMGPGMNGMQGSPGGHHY
MQQPGMQAPPPYPGMGQLGQPSHLQPTTPMFVAPPPKTQRVLHSEAYLKYIEGLNAENNT
VSKWDQSLKARRRDVHLSKEQESRLPSHWLKSKGAHTTMADALWRLRDLMLRDSLNIHQA
YNL
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgagttcgaaaagaagaagggccacctctccctccagtagtgtgagcggaggg
gactttgacgatgcatcctccactcctggaagcggacgaaaaagacgaagagcctttaat
gttcctacagtagaccctattgctgtgtgccatgagttgtacaacactgtcagggaccac
aaggatgaccaggggaggctgctttgtgagctgttcatcagggtaccaaagagaaggaac
ctgccagactactatgaggtggtgtcccagcccatagacatgaccaagatccagcagaag
ctcaagtcagaggattaccaagatgtggagcagctcactgctgatttccagcttatgttc
aaaaatgccaagaactactataaggctgaaagtgaagagtacaaggcagcctgcaggctg
tgggaactctacgttcacatcaggaatgagtttgtgcagccaggggatggtgatgaagat
gatgacgatggtgaagacatgctggataatcctgctctctccactgaagatgagactcca
ccgagctgcctgaaggaggttttggagcagctgttggatgctgtggtgtcatacacggac
acatcagggcgggtcatcagtgagctctttcagaagctgccttccaaaatgcactaccca
gactactatgccgttatcaaggagcccattgatcttagagccatcgctcagagaatacaa
attgggtactacaaaagtgtcaccgccatggccaaggatgttgaccttctggcaaaaaat
gcaaaaacatacaatgaaccaggatctcaggtttttaaggatgctaacaccatcaagaag
gtctttatccagagaaagactgagatcgaccacgctgagcccactaagaccagtgtccgc
atcaggaaccggaggtcagcccaaggagaccgtctctctgccatcactctggctctgcag
tacggctcagagagtgacgaggacgccctgctctctggctctgtgcattatgacgagggt
gagtctgaggcggagtgcctgagcttcagtatggacatgggtaacccagtgttccagcta
tatgaggctgtgagggggggcaggaacagccagggacagctcctctctgaacccttcctc
caggtgccctccaggaaagaataccctgactactaccagcaggtcaaacagcccatcgcc
ctccagcagatcagggagaagatgaagaacggggagtaccagagcgtggaccagatggac
tctgacctcactctgatgtttgagaacgctaagcgctacaacgtgcccaactcggccatc
ttcaaacgggccctgcggctgcaacagatcctgctgatgaagaagagggagctgttgagg
agaggcgatgaagaggatcaggacagcattctgtcctctgacacaggaactggcagtgct
accaagaagaaaagccataagaagaatgtgaagaagaaccgtatgaaggcactgtatgct
gcagtgactgaagccagagaagcagggaccaaccggaggctctgtgatctgttcatggtg
aagccctccaagaaggattacgcagactactacaaggtgatcctggagcccatggatctt
aagaccatggagcataacatccgctcagagcgctacgccaccgaagaggcccttatggac
gacatgaggctgatgtttcgcaacgcacgccactataacgaggagggatctcaggtttat
gatgatgctgacatcctggagaagatcgtgaaggacaagcggaaggagctaggagcttct
cctgaggagggcactgacaacatgggatctcctaagctcaaactaagaaagagtggcgcg
tctcctaagaagtccaataaatacctgaccccgctgcagcagcgcctcaatgagctgtat
gatgctgtgaggaactacacagacggcagggggcgacgtatctccaccatcttcttgcgc
cttccgtcccgcgctgagctgcctgactactactccaccatcaagaggcccatcgacatg
gagcgcctgcgcagccacatggcgggcggccgttatcaggacgtggatgcactggtggaa
gactttgccctgatgttcaacaacgcctgtacctacaacgagccagagagcctgatctac
cgcgacgctctgcttctccaccgcgtgctcctggagacccgcaggctgcaggagggagtg
gaggagggtggctcgccccctgctgtggggcctctagtcagggagctgatcaggaacctg
tttatgtctgtgcttgggcaccaagacgaggaggggaggtgttacagcgactcactggct
gagatccctgcccaggacccggccagcccagagaagcctttgctcaactttgacgtgatc
cgggccaacgtagagcgaggacgctaccgcaggctggacgtgttccaggagcacatgttt
gaggtgctggagaaggccaggcgcttgcaccggacagactctgagatatttgaagatgcg
gtggagctgcagcagttctttataaagatcagagatgagctgtgtaagaacggtgagatc
ctcctctccccggctctcagctacacctctaaacacatgcacagtgacgtagagcaggag
aagagagagaaactacccaaggagatggaggaggacaaactgaagagggaggaggagaat
aaagaggagggagagaaggctgaggacccagctgggggaggtgcggggccagagaggatg
tacagtcaggactgcagctttgagaaccgcacctaccacgtgggagactgtgtctacgtg
cagctggccgaggccaaccgcaagcctcacatcgtctgcatcgagcgcctgtgggaggac
gaagcaggcgagaagtggctgtatggctgttggttctacaggcccggtgagaccttccat
ctggcaacacgcaagttcctccagcaagaggtcttcaagagtgactacttcaacaaagta
ctagtcagcaagatactgggcaaatgcatggtcatgtttgtcaaggattacttcaagctg
cagcctgagggagtcagaccagaggacgtgtacgtctgtgagtcccgttattctgccagg
aacaaggcctttaaaaagatcaagctgtgggccgtgccagccgccgtgaggtttgtccct
cgggacgtgcctttgcccgttgtccgggtggcctccatgtatgccaaacgtgatcaggag
aaactgctggctgtggctgataatggcagccgcagcatcgtcgacaaggagcgtgaggat
gtgccagtggagatgactggaggggagccaggctgtccgtactatgaccagcttcactac
aacaacatgtggctgaaggtgggagactgtgtctacatccagtcacatgagctcattaaa
ccacgcatcggcaggatagagaagctgtgggtgcgtgacggagcagctttcttctttggg
cccatcttcatccacccagaggagactgaacacgagcccaccaggatgttttacaagaga
gaggtgtttctcagcaacctggaggagacatgtcccatgacctgcgtcataggtaaatgt
gtggtgtcgtcctttaaggactacctgtcgtgtcggcccactgaggtgtctgaggaggac
gtgttgctgtgcgagagccgctacatcgagagtgagaagcaaatgaagaagtttaaaggc
ctgaagcgcttctccctccacgctaaggtggtggacgacgagatctactacttcaggaag
ttgatagtgccccagaaggagccgtctcctctgctgaataagaagattgaagagttggag
atgaagctggcagacacgaatgagggggatgaggatctggatgacctggaggatgaggac
gaggctccagagactccctccatgcccatcatgcagacccctctggcaagcgatttggac
atcatgccttacacccctcctcagtccacgcccaaggtaaagggtgtgtctaagaaggat
ggagccaagaggaagatgaacatgagcggctacatcctgttcagcagtgagatgcgttca
gtcatcaagacccgccaccctgatttctcctttggggagctcagccgtctggtgggaacc
gagtggaggaacctggaggctcccaagaaagtagagtatgaagagcgggcagccagggtg
gtggagcagcaggagagggagagggcagcccagcagcaagcttcccctagagcaggtacc
ccagtaggggccatgatgggaatgacgcctggtccaggcatgatgggagcttatggcccc
ccctacggtatgcccatgcagggcccctatgagggcttgctgggtatgggcccaatgggc
tcgatgcccccccaacacttccagccaggtatgcctgggtaccaccctggcatgccccac
ccgggtatgatgggtcctggtatgaatggcatgcaaggaagtcccggaggccaccactac
atgcagcagcctgggatgcaggcacctccaccatacccaggcatgggccagctagggcaa
ccctcccacctccagcccacgacccccatgtttgtggctccaccgcccaagacccagagg
gtgctccactctgaggcctacctcaagtacattgagggcctgaacgcagagaacaacact
gtcagcaagtgggaccaatctctcaaagcacgtaggagagatgtccacctgtccaaagag
caggagagcagactcccttcccattggttgaagagcaagggagcccacacgacgatggca
gacgcactgtggcgcctgcgggacctgatgcttcgagactcactgaacatacatcaggcg
tacaacttgtag
DBGET
integrated database retrieval system
