Oncorhynchus masou masou (cherry salmon): 135541813
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Entry
135541813 CDS
T10723
Name
(RefSeq) vacuolar protein sorting-associated protein 33A
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04140
Autophagy - animal
omm04142
Lysosome biogenesis
omm04145
Phagocytosis
omm04148
Efferocytosis
omm05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
135541813
04142 Lysosome biogenesis
135541813
04140 Autophagy - animal
135541813
04148 Efferocytosis
135541813
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135541813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135541813
Membrane trafficking [BR:
omm04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
135541813
Hops complex
135541813
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
RMD9_mid
Takusan
Motif
Other DBs
NCBI-GeneID:
135541813
NCBI-ProteinID:
XP_064824290
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All DBs
Position
1:31163246..31174228
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AA seq
601 aa
AA seq
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MSAHLSYGRVNLNILREAARKELREFLDKCGGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKGGHLPAADVKNIIFFVRPRLELMDIIAENVISEDKMHSPRDFHILFVPRRSML
CEQRLKEQGVLGSFINIDEYILDLIPYDGDLLSMESEGAFRECYLESDQTSLYHTAKGLM
TLQALYGTIPQIFGKGECARHVANMMLRMKREFAGSQTQILPVFDSLLLLDRNVDLLTPL
ATQLTYEGLIDEVYGITNGYVKLPPEKFSAQKKQGEAGKDLPTEPKKMQLNSAEELYAEI
RDKNFNGVGAALSKKAKIISAAFEERHSAKTVGEIKQFVSQLPHMQAARSSLANHTSIAE
LIKDITTSEAFFDNLTVEQEFMTGVDTDKVNTYIEDCIAQKDPLIKILRLVCMQSVCNNG
LKQKLLDYYKREILQTYGYEHMLTLNNLEKTGLLKPQTSTRNNYPTIRKTLKLWMEDANE
QNPNDISYVYSGYAPLSIRLTQVLARPGWRSIEEVLKMLPGPHFEERQQLPAGLHKKRQQ
GENRTTLVFFLGGVTYAEIAALRFLSQMEDGGTEYIIATTKLINGTSWIKSLMDRPEAQA
C
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgcacttatcatatggaagagtaaatttaaacattttgagggaagcagcgcgg
aaggagctccgtgagtttttggacaaatgtggaggaagcaaggctattgtgtgggatgaa
tacctgactgggccctttggattgatagcacaatattcattgttgaaggaacatgaggtg
gagaagatgttcacactcaaaggggggcatctccctgctgctgacgtgaaaaatataatc
ttctttgtccgtcccaggcttgagctgatggatattatagcagaaaatgtaatcagtgag
gataagatgcattccccacgtgatttccacattttgtttgtgccacggcggagcatgctc
tgtgagcagcggctgaaagagcagggggtcctgggctcgtttatcaacatagacgagtac
atcctagacctcatcccctatgatggagacctgctctccatggagtctgagggggcattc
agggagtgctatctggaaagtgaccagacaagtctgtaccacactgccaagggccttatg
actctccaggctctgtatgggaccatcccccagatatttgggaaaggggagtgtgcacgg
catgtagctaacatgatgcttaggatgaaaagggagtttgctggcagccagactcagatc
ctacctgtgtttgactcactgctgctgctggaccgcaatgtagacctgctcacccctttg
gccacacagctcacatacgagggcctcattgacgaagtctatggaattaccaacggttat
gtgaagttgcctcctgagaagttttctgcccaaaagaagcagggtgaggcgggtaaagac
ctgcccacggagcccaagaagatgcagctcaactcagcagaggagctgtatgctgagata
cgggacaaaaacttcaatggcgtaggggctgcactgagcaagaaggccaagatcatctcc
gctgcatttgaggagcggcacagtgccaaaacagtgggcgagataaagcagtttgtgtcc
cagctgccccacatgcaggcagcacggagctcgctggccaatcacacctccatagctgag
ctcatcaaggacatcaccacgtctgaggccttctttgataacctgacagtggagcaggag
tttatgactggagtcgatacagacaaggttaacacatacatagaggactgcatcgcccag
aaggatcccctaatcaaaatcctgcggctggtctgtatgcagtcggtctgcaacaatggc
ctcaagcagaagttgttggactactacaagagggagattctgcagacttatggatatgaa
cacatgcttaccctcaacaacctggagaagacgggtcttctgaagccccagacaagcacc
aggaataactaccccaccatcaggaagacactcaaactctggatggaggatgccaatgaa
cagaaccccaacgacatctcctatgtgtacagtggctatgctcctcttagcatccgtctg
acccaggtgttggccaggcccggctggcgcagcatcgaggaggttctgaagatgctccct
ggtccacactttgaggagcgacaacagctgcctgctggtctccataagaaacgccagcag
ggggagaacaggaccacactggtgttctttctgggaggggtgacgtacgcggaaatcgct
gccctgcgcttcctgtctcagatggaggatggtggcacagaatacatcattgccaccacc
aagctcatcaatggtacgagctggatcaaatccctaatggaccgtcctgaggctcaggcc
tgctga
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